[Fri Aug 26 16:50:24 2016] >Input file: TMQ8NCW0S2D.pdb >TM segments: A108-131 MAIDEN score = 2.5228 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L125A-D130A 0.768692249814628 H120A-D130A 0.641233686580813 Y124A-D130A 0.619947316824766 M121A-D130A 0.399133158319655 P122A-S131A 0.289226573731943 G126A-S131A 0.261151291555897 P122A-C127A 0.237986356404306 P122A-D130A 0.213166267106822 G123A-V129A 0.209376416482733 P117A-P122A 0.189351850603867 H120A-V129A 0.14294133949262 L125A-S131A 0.127591903397802 M121A-G126A 0.12582582067443 C119A-Y124A 0.125023976752967 C119A-V129A 0.049069548500186 G123A-D130A 0.0433178923777051 H120A-L125A 0.029533886227799 P122A-F128A 0.0282939807862084 S118A-D130A 0.0244233952425246 S118A-G123A 0.00892360771911349 Y113A-S118A -0.0071074399430282 H120A-S131A -0.043774165191099 M121A-C127A -0.0851266148222427 M121A-S131A -0.0854241088063022 M121A-F128A -0.104103287453353 G123A-S131A -0.110492038662771 C119A-D130A -0.160585095144385 G123A-F128A -0.182892705419341 Y124A-S131A -0.256222008086732 P122A-V129A -0.283198885593938 M121A-V129A -0.297089101724811 Y124A-V129A -0.395444704873763