[Fri Aug 26 18:16:13 2016] >Input file: TMQ8NH22M16D.pdb >TM segments: 99-113 MAIDEN score = -5.2912 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- M103 -C108 0.298244326269461 S100 -C109 0.0944154155806924 V105 -W110 0.0538696423846909 G104 -P112 0.0514909419232805 V107 -P112 0.0394082825598514 L99 -C108 0.0347965505183172 I102 -W110 0.0258050848965103 F106 -P112 0.00970047507896266 S100 -C108 -0.000229150641548603 V105 -P112 -0.0251985943476152 S100 -V105 -0.0503993228730193 G104 -W110 -0.0572053121357863 V105 -F113 -0.0820564471386724 S100 -F106 -0.0871823888002607 I102 -L111 -0.101695246493416 L99 -V105 -0.114615703589578 F106 -F113 -0.120618119396643 V101 -C108 -0.122903388216144 L99 -F106 -0.123083397885889 M103 -L111 -0.129800455625772 I102 -C109 -0.139951406813735 V101 -W110 -0.145383028060719 M103 -W110 -0.159885242837881 G104 -L111 -0.176250366661454 G104 -C109 -0.184140102380783 V101 -C109 -0.191173932459979 M103 -C109 -0.191268251450958 V107 -F113 -0.191787776231709 S100 -V107 -0.208336530932701 L99 -V107 -0.229587384412246 V105 -L111 -0.246530211526698 I102 -C108 -0.260155668394304 V101 -F106 -0.28066107275183 F106 -L111 -0.338798003115246 V101 -V107 -0.34758905857019 L99 -G104 -0.371868849864206 I102 -V107 -0.458483738939587 C108 -F113 -0.76209378229732