[Mon Aug 29 17:55:10 2016] >Input file: TMQ8TDF5S1G.pdb >TM segments: H51-63_H66-80_H128-139 MAIDEN score = 27.8697 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C79H-R131H 10 I69H-K136H 5.60008869548722 I71H-W134H 2.11282678571924 I69H-I135H 1.86208344182313 I72H-L133H 1.23506679640062 C79H-S128H 1.20285929973687 I71H-I135H 1.18926857822401 I71H-L133H 1.13582540067158 I72H-F132H 1.1109766941051 Y70H-I135H 1.05925326698874 I80H-S128H 1.02240072657024 E73H-I80H 0.978486329222374 C68H-F137H 0.792083204531157 I69H-W134H 0.759399208779168 C79H-F132H 0.730253265784732 I71H-F132H 0.669903035739628 I80H-S129H 0.648690209199507 A74H-F132H 0.611997361153499 A74H-I80H 0.564526635795432 P63H-A139H 0.512574735540748 I80H-L133H 0.49518474095896 R66H-F137H 0.489204544998103 I80H-F132H 0.478216103167071 E73H-C79H 0.427910117576786 Y70H-L133H 0.402041479328537 E67H-A139H 0.387920683532507 I69H-F137H 0.377873270328478 C79H-S129H 0.350904688644569 I80H-R131H 0.338491955006777 G51H-Y70H 0.337808791989628 I80H-G130H 0.330027072439408 I72H-W134H 0.326923884265752 P76H-S128H 0.311396203007207 R66H-K136H 0.307966542254688 C79H-I135H 0.306305020831219 S55H-F137H 0.284963605547054 S128H-L133H 0.282051062987285 K61H-C68H 0.281055623123136 N57H-C68H 0.276682650567091 N57H-P63H 0.254583991195401 I72H-I135H 0.253385185164738 Y62H-A139H 0.248605909214071 A75H-S128H 0.217747203043211 P63H-C68H 0.215244143047431 T54H-E67H 0.214365630490769 F53H-Y62H 0.21176832714139 T54H-I71H 0.199892955619179 P56H-R66H 0.198774638734615 G51H-C79H 0.198360646593928 A74H-S129H 0.197321451426646 Y58H-C68H 0.190658244368177 T54H-P59H 0.178767072461188 A74H-C79H 0.175941747244685 S55H-C68H 0.165720888604551 R77H-G130H 0.161118609570545 T54H-I72H 0.15893152748544 C68H-L133H 0.156186800324047 P56H-K61H 0.144233502965289 Y70H-I80H 0.142821419255335 Y70H-W134H 0.137306918820718 C79H-G130H 0.131836815116225 N57H-E67H 0.129701777139749 I52H-L133H 0.128323576736327 E73H-W134H 0.127590907438894 P56H-C68H 0.126542746425655 I71H-K136H 0.123705005560431 T54H-S60H 0.122462206222391 I72H-R131H 0.122047981341916 P56H-Y70H 0.121584799280331 S128H-I135H 0.119516862524039 T54H-A139H 0.116373677711865 G51H-I71H 0.114252626742759 S129H-W134H 0.114199928361081 I52H-I80H 0.112483135094324 I72H-I80H 0.110555527098715 N57H-F137H 0.109045752553828 N57H-R66H 0.104618098536206 R66H-F138H 0.0955441726607162 G51H-E73H 0.0868868867674255 N57H-A139H 0.0861496812085836 Y58H-R66H 0.0824373813990471 T54H-P63H 0.0798851957376172 A75H-S129H 0.0776189425185141 R77H-S128H 0.0745736476537614 T54H-R66H 0.0717278213670249 C68H-I135H 0.0701384198088757 I71H-I80H 0.0677194044801919 Y62H-E67H 0.0664201202031086 F53H-I80H 0.0634994938871922 E73H-F132H 0.0616737094478634 I52H-I71H 0.0569593191279463 E67H-W134H 0.0563930289307288 I69H-F132H 0.0562658624455002 A74H-W134H 0.0536256128905404 G51H-L133H 0.0496000326516901 G51H-I80H 0.0434116517667773 F53H-P59H 0.0305979207633404 F53H-L133H 0.0284061016273289 I52H-I72H 0.026104357339622 P56H-E67H 0.025699817065064 I52H-P59H 0.0224895006078156 P59H-F137H 0.022470652547697 Y58H-E67H 0.0202387787982659 P56H-I69H 0.0155810935869523 I72H-F137H 0.0129174813909803 P76H-L133H 0.0121022469731802 I52H-K136H 0.0120339721405416 F53H-E73H 0.00775474578951796 T54H-K61H 0.00757394323076888 I52H-E73H 0.00739281839190653 R77H-L133H 0.00726549542051913 I72H-S129H 0.00528310967049794 C68H-K136H 0.00381861620039237 I71H-C79H 0.00303183508793259 C79H-W134H 0.0021935430080382 I71H-G130H -4.6044078651386e-05 K61H-E67H -0.00385212768330323 K61H-R66H -0.0039181335248033 S55H-S60H -0.00532832755868062 T54H-L133H -0.00744486350540363 I72H-Q78H -0.0086930854673275 I71H-Q78H -0.00948842390396898 Y62H-K136H -0.0120109778626927 R66H-I135H -0.0121541130880436 A75H-F132H -0.0133676967558016 E67H-F138H -0.0145175371544228 I71H-S128H -0.0149662753325822 I52H-N57H -0.0151628633705276 I69H-A139H -0.0173265077231877 P63H-F137H -0.0174975251339029 G51H-A74H -0.0179970147732651 A74H-L133H -0.0197599375551665 S55H-P63H -0.0217710349619527 I52H-Y58H -0.0229420993814653 I71H-P76H -0.0254285526632048 P76H-G130H -0.0285121658302891 E73H-R131H -0.0289991461104506 T54H-K136H -0.0291764987819771 Y58H-F137H -0.0300147990310196 S55H-E67H -0.0309287558284979 T54H-F137H -0.030965661040192 F53H-S60H -0.0310746727042497 F53H-I135H -0.0310907958036362 E73H-K136H -0.032460604149193 S55H-I71H -0.0325809903712216 S55H-W134H -0.0343539353483131 P56H-F138H -0.0345118707747333 E73H-S128H -0.0347282624457175 S129H-I135H -0.0367125596647648 C68H-F138H -0.0376625137345616 E67H-F137H -0.0376665015489218 I71H-S129H -0.0401980310400285 P63H-K136H -0.0430828837364263 T54H-F138H -0.0438513346414937 Q78H-L133H -0.0446088651174215 Y58H-A139H -0.0453176031146203 I52H-A74H -0.0497539677164873 Y70H-R131H -0.0529122650318521 F53H-I71H -0.0545135147223146 S55H-R66H -0.0545387739043579 I52H-Y70H -0.0553790317572216 N57H-F138H -0.056872938240625 T54H-W134H -0.0578478916944404 F53H-C68H -0.0580705129046781 S55H-Y70H -0.0618176204764858 S55H-K136H -0.0629548387916867 F53H-K136H -0.0646562664332313 E73H-S129H -0.0664150312611305 Y70H-S128H -0.0733259011297183 I72H-R77H -0.0756728547584666 T54H-Y62H -0.0769636486367515 K61H-F137H -0.0821401976640974 R77H-S129H -0.0901337067337822 Y70H-F138H -0.0925019406010605 E67H-K136H -0.0959466842317279 A75H-L133H -0.097869416967161 F53H-R66H -0.0999163014221041 S55H-F138H -0.100125045020908 Y62H-I69H -0.100275274574382 Q78H-F132H -0.102684238398279 R77H-R131H -0.103061977381198 G51H-I135H -0.103139609758087 I72H-K136H -0.103484719752317 I71H-F137H -0.103610228072956 F53H-Y70H -0.103679803554722 G130H-I135H -0.105294608783433 F53H-E67H -0.107154949373878 Q78H-S129H -0.110059562290123 A74H-I135H -0.111974507735538 S55H-I135H -0.112304974557659 K61H-F138H -0.116206385045794 P56H-I135H -0.117454682456323 T54H-I69H -0.128406335628652 N57H-Y62H -0.130417237920469 Y70H-F137H -0.130655100852054 K61H-A139H -0.131076006762854 T54H-Y70H -0.135293259497259 F53H-K61H -0.135530566963523 F53H-F137H -0.138135113658964 R77H-F132H -0.140537408715351 I52H-F137H -0.141080905418359 P56H-A139H -0.142511065505328 F53H-I69H -0.146475969992965 S55H-K61H -0.148612208448017 Q78H-S128H -0.154580341585359 Y62H-F138H -0.15927948030754 P56H-K136H -0.159435065897726 E73H-Q78H -0.16144639552966 I52H-W134H -0.161674879556044 I52H-I69H -0.165130888662707 Y58H-F138H -0.166798544790554 Y62H-F137H -0.169490816761331 F53H-Y58H -0.172189317356757 Y58H-P63H -0.175781059152352 Y70H-F132H -0.177597718511473 S55H-I69H -0.177673698096434 E73H-I135H -0.178348041062189 E73H-L133H -0.180796452599909 S128H-W134H -0.183915761512213 P76H-F132H -0.186307221591998 E67H-I135H -0.194472819719471 A74H-S128H -0.19558666670831 I52H-C68H -0.212607991576823 F53H-F138H -0.212787619079741 S55H-A139H -0.215232320749093 C68H-A139H -0.217013260258096 G51H-I72H -0.217594338195277 F53H-W134H -0.219901271924891 I71H-R131H -0.219981820566039 I80H-I135H -0.227678619749137 P63H-F138H -0.228194985441376 Q78H-G130H -0.229288488879133 I72H-C79H -0.233216820783415 I72H-G130H -0.235022508459604 P56H-Y62H -0.236657897281916 T54H-I135H -0.239086317761038 C79H-L133H -0.244482938655868 I72H-S128H -0.246522537472783 A75H-I80H -0.246636725780295 I52H-I135H -0.254041922527295 P56H-F137H -0.255062720681645 A75H-G130H -0.26023502538371 E73H-G130H -0.262669925828701 F53H-I72H -0.266989196891113 I80H-W134H -0.267785088044018 R66H-A139H -0.282131658274363 P76H-S129H -0.291770856294824 C68H-W134H -0.301567977204243 Y62H-C68H -0.305774436498922 I69H-L133H -0.309889487472275 A75H-R131H -0.311987492589907 I69H-F138H -0.326385902286884 T54H-C68H -0.348886030117048 A74H-G130H -0.351566371322818 S55H-Y62H -0.354109817353233 Y70H-K136H -0.418901675969431 P76H-R131H -0.452824541320636 A74H-R131H -0.476858405975923 P56H-P63H -0.543873110850054 Q78H-R131H -0.974498170723809