[Fri Aug 26 18:11:31 2016] >Input file: TMQ8TDF5S3D.pdb >TM segments: A201-210_A212-221 MAIDEN score = 0.9990 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A208A-K213A 0.911231051774524 A208A-I214A 0.601274002525488 R207A-K213A 0.33080525902683 I206A-I214A 0.322140363069091 P209A-Y215A 0.251370132237211 L216A-Y221A 0.141801270926784 I206A-S212A 0.119289112865169 Y205A-L216A 0.10223306556287 Y205A-S212A 0.0968919663290349 P210A-Y215A 0.0856624907621764 Y205A-Y215A 0.0555209717138077 Y205A-F218A 0.0483111584748883 W204A-I214A 0.0375946653059565 R207A-I214A 0.0333144879834526 I206A-L216A 0.0132515241335773 W204A-Y215A -0.0403682699788245 A208A-Y215A -0.0450275436828735 I206A-R217A -0.0477730701345813 W204A-F218A -0.0518505353571221 A208A-L216A -0.0609763927888434 Y205A-R217A -0.0713276861031664 Y205A-K213A -0.0717891933778176 R207A-L216A -0.0819544431908596 R207A-S212A -0.0874180833187008 R207A-Y215A -0.118664580476588 I206A-F218A -0.1398714626358 Y205A-I214A -0.14405119645539 W204A-L216A -0.182656975130637 W204A-R217A -0.186014270195649 I206A-Y215A -0.204619326432816 P209A-I214A -0.28140877485672 I206A-K213A -0.335948835001773