[Mon Aug 29 17:59:27 2016] >Input file: TMQ8VZ14S1G.pdb >TM segments: A239-267 MAIDEN score = 25.3021 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L247A-K253A 10 L245A-H255A 10 H255A-D260A 0.92658109048163 K244A-A257A 0.910834394508206 D243A-A256A 0.859514657489941 R246A-V259A 0.805351042396967 L247A-F254A 0.692730101427613 L247A-H252A 0.690794103714229 Y239A-L245A 0.655225345009074 F254A-V259A 0.639097267961661 Y239A-F254A 0.618022037983533 L245A-F254A 0.518006325208093 R246A-H252A 0.498636609323463 R246A-C258A 0.389960902627776 F254A-D260A 0.370685908470956 L248A-K253A 0.368699691630473 L245A-A256A 0.346957896614304 K244A-C251A 0.341578397962163 L245A-V259A 0.313071786640374 H252A-C258A 0.309691952014975 C251A-V259A 0.307326510501967 L245A-A257A 0.297874324604523 C258A-R267A 0.296849222274293 Y239A-K253A 0.272533930049208 K244A-K253A 0.26985400577988 L248A-H255A 0.256339080794841 R246A-F254A 0.216567901367587 D243A-A257A 0.214759026585007 V259A-S265A 0.212113826461195 K253A-D260A 0.192623561835993 L247A-V259A 0.186385144579185 R246A-C251A 0.185031061395095 A256A-T264A 0.184457333828515 L245A-C251A 0.180104391936635 G242A-A256A 0.178209096324938 T240A-F254A 0.173138708746678 R246A-W262A 0.165223523813064 L245A-W262A 0.16300602464398 K244A-S261A 0.15809864239289 H255A-L263A 0.157648228086415 R246A-H255A 0.150969443724648 P249A-R267A 0.150965869607691 Y239A-C251A 0.145725469585677 C258A-S265A 0.140504133445229 H252A-A257A 0.139325957010257 V241A-H255A 0.132911182627431 L245A-S261A 0.127296823969052 Y239A-K244A 0.125273901205839 L247A-L263A 0.122425155227735 V241A-K253A 0.120256727407766 L248A-A257A 0.114704147845853 K253A-V259A 0.109518284082483 L248A-L263A 0.103776216417035 V241A-A256A 0.100341360789429 K244A-F254A 0.0959009214473276 A257A-S265A 0.0946221703297203 L247A-D260A 0.094531422291086 Y239A-A257A 0.0884459112414704 L247A-R267A 0.0858624530767549 Y239A-H252A 0.0788017823708272 T240A-A257A 0.0760993285177962 T240A-L245A 0.0726895703914749 S261A-R267A 0.0698543336652531 A256A-R267A 0.0686171835303186 F254A-R267A 0.062250736006181 C250A-V259A 0.061426145416926 R246A-K253A 0.0610914983157349 L248A-C258A 0.0606023301012755 Y239A-H255A 0.0602600741996666 T240A-R246A 0.0600635628248073 D243A-S261A 0.0526311329710303 K253A-W262A 0.0478998276387332 V241A-R246A 0.0467774035313313 G242A-F254A 0.04183255975967 Y239A-A256A 0.0398213414294251 C250A-R267A 0.039502369905664 L247A-A257A 0.0334948303878839 D243A-D260A 0.0319382245588686 L248A-A256A 0.0314757853679155 H252A-V259A 0.0310485543666443 K244A-A256A 0.0306233776028799 D243A-V259A 0.0245751410482917 L247A-C258A 0.0240244925548829 W262A-R267A 0.0164212969939117 A257A-T264A 0.0163546038822409 H255A-R267A 0.015795170200408 F254A-W266A 0.00921239414129804 F254A-T264A 0.00661075067917327 T240A-K253A 0.00495331616517092 Y239A-L247A -0.000201864353844616 L248A-R267A -0.000843451522912986 C251A-A256A -0.00223618511149493 G242A-H255A -0.00297900005364227 V259A-T264A -0.00698217889533126 C258A-W266A -0.00718390881593889 H252A-R267A -0.00801276729934797 L247A-W262A -0.0084161335260502 Y239A-V259A -0.00909333414448987 G242A-A257A -0.0127999705948412 A257A-W262A -0.0204977524557899 V241A-F254A -0.0244147641101623 H252A-L263A -0.0248179146975396 H252A-W262A -0.0274549626387932 V241A-L247A -0.0301029543865878 L247A-A256A -0.0329953216043111 T240A-C258A -0.0354431727005602 L248A-W266A -0.0397340037562062 V241A-A257A -0.0400410012538606 L248A-D260A -0.0423826173120307 K253A-S261A -0.0429879277556005 K244A-W262A -0.045668600521215 R246A-S261A -0.0501371428048065 D260A-S265A -0.0505334683219933 T240A-A256A -0.0518914529023697 D260A-W266A -0.0543683126291281 A256A-W266A -0.0569194639782943 K244A-H252A -0.0576620098806435 R246A-R267A -0.062977441431452 A257A-W266A -0.0634628382739464 Y239A-R246A -0.064042079741546 H252A-D260A -0.0681982018205352 P249A-V259A -0.0734889672576331 D243A-K253A -0.0802124638145694 L245A-C250A -0.0878207257895889 R246A-W266A -0.0929162019173844 T240A-L247A -0.100521867546383 F254A-L263A -0.101562489926544 R246A-A257A -0.101898092588186 T240A-H252A -0.111610781184417 L245A-K253A -0.113741741348302 H255A-T264A -0.11829057961791 P249A-F254A -0.118336010797436 G242A-K253A -0.120401124439622 V259A-R267A -0.121778044746842 D260A-R267A -0.121879923446127 L248A-W262A -0.134092001887173 R246A-L263A -0.139160777996115 T240A-H255A -0.13931005630453 L245A-H252A -0.142171105771565 K244A-D260A -0.14475087168041 A256A-W262A -0.149865908042908 L245A-L263A -0.150948462959034 K244A-V259A -0.175646298391774 A257A-R267A -0.188789768474539 H255A-S261A -0.189194763302281 V259A-W266A -0.191617498157405 S261A-W266A -0.194370502764538 D243A-F254A -0.196372739924532 K244A-C258A -0.19814852914608 F254A-S261A -0.199154962337452 K253A-R267A -0.204939542010163 G242A-C258A -0.233403426175879 K253A-L263A -0.235314392710299 C258A-L263A -0.242175316578537 R246A-D260A -0.248672123087146 A257A-L263A -0.250090646471712 A256A-L263A -0.273791588675369 L245A-C258A -0.284146310487993 L248A-V259A -0.289831164109228 L245A-D260A -0.295963355138278 L248A-F254A -0.302940912023645 C258A-T264A -0.308152645081876 Y239A-C258A -0.317113204138484 K253A-C258A -0.319278696532703 D243A-H255A -0.363611612348404 L247A-H255A -0.366842971904092 H255A-W262A -0.385085428977155 D243A-C258A -0.385715764041861 F254A-W262A -0.425673710093714 A256A-S261A -0.49135615124351 R246A-A256A -0.668084075601865 K244A-H255A -0.805862056880914