[Mon Aug 29 18:04:15 2016] >Input file: TMQ8WVE7M1G.pdb >TM segments: 81-109 MAIDEN score = -10.1605 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- G98 -A104 0.313181388342874 A97 -S102 0.311791937943789 V92 -A97 0.302259811701806 L87 -P94 0.248379684333684 V92 -G98 0.169327143361309 S85 -P94 0.167414449470901 P94 -L100 0.165953452746809 F81 -I86 0.144346557164381 G98 -I105 0.123992321407599 L100 -I105 0.109507509303516 M89 -A97 0.101879373296401 L100 -V108 0.0843234431372575 I99 -V108 0.0757778996097747 S85 -G93 0.0701389907277288 I91 -G98 0.0698268220156475 M82 -M89 0.0592218337018192 I99 -I105 0.0517739737119545 A97 -A103 0.0494915924417993 L88 -A97 0.0444674384503916 G90 -G98 0.0401586695024272 A97 -A104 0.0248330317876846 G93 -I99 0.0166658535405237 I86 -P94 0.0111616478235774 I99 -G107 0.00479677713911997 A103 -V108 0.00422644356728274 S83 -I91 -0.0146377179939587 T96 -S102 -0.0154158359785015 G93 -G98 -0.0245541171100112 M82 -G90 -0.0277796114441022 G90 -T96 -0.0376761017776301 T101 -Y109 -0.0396327120507325 T96 -A103 -0.0413862381440512 T101 -V108 -0.0423143556336738 G98 -A106 -0.0564931693663961 I95 -T101 -0.0570623947312541 G93 -L100 -0.0698205155706093 T101 -A106 -0.0705817271648232 M82 -I91 -0.0721371203069445 S102 -Y109 -0.0733120858089269 I95 -S102 -0.079195824434797 V84 -G93 -0.0820409886881812 I99 -Y109 -0.0832227336520133 L87 -T96 -0.0884576412412368 L88 -T96 -0.0920992546863264 S83 -V92 -0.0977176250296263 G90 -A97 -0.103674925060616 L100 -Y109 -0.105850107665308 V84 -V92 -0.107241398188674 S83 -G90 -0.116640881350905 V92 -I99 -0.117728722784906 L87 -I95 -0.118072019255146 F81 -G90 -0.121531079371179 I86 -I95 -0.154652961414495 L100 -G107 -0.160203897162996 F81 -L88 -0.162534253030675 I91 -T96 -0.176291577771633 L87 -V92 -0.176420965858583 V84 -I91 -0.176835539251117 M89 -P94 -0.178885674651204 S83 -M89 -0.190821911181233 M82 -L87 -0.191950664885061 G98 -A103 -0.192785400269631 T101 -G107 -0.199328549427994 V84 -G90 -0.202447249714686 I99 -A106 -0.204252162565674 F81 -M89 -0.211330073532352 T96 -T101 -0.22490371552729 P94 -I99 -0.226241134736989 M89 -T96 -0.226785982380544 A103 -Y109 -0.228390926413959 L88 -I95 -0.233641154960084 G90 -I95 -0.240746291971785 S102 -G107 -0.244822082447751 S102 -V108 -0.250193918338483 S85 -G90 -0.253442105105496 I86 -G93 -0.256686615490455 P94 -T101 -0.257657111979579 I86 -I91 -0.273858209445828 S85 -V92 -0.27508170160396 F81 -L87 -0.282496810745707 L100 -A106 -0.283285092747823 A104 -Y109 -0.307697551275085 I95 -L100 -0.311045690954716 V84 -M89 -0.312405232790876 L87 -G93 -0.316857042248505 I99 -A104 -0.317104525816413 S85 -I91 -0.326030048452062 S83 -L88 -0.336080960945132 I91 -A97 -0.337219799699094 L88 -G93 -0.356447229090016 M89 -I95 -0.367527219380651 M82 -L88 -0.432554703788124 I86 -V92 -0.435837358708498 L88 -P94 -0.475350897207968