[Mon Aug 29 18:08:58 2016] >Input file: TMQ8XQ32M1G.pdb >TM segments: 135-153_ 173-197_ 267-297 MAIDEN score = 2.3304 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- Q270 -C282 10 D273 -V279 1.35743504711575 G271 -C282 0.916277223602875 I142 -E193 0.865204135367176 A267 -D283 0.858566087236813 T268 -C282 0.78384900086232 P153 -K182 0.700234752988264 P269 -R284 0.649025128249967 I188 -R194 0.538634610336455 P138 -E193 0.491464018103208 M149 -K182 0.477030635070942 M149 -A185 0.431149269847912 V146 -G189 0.423317226964055 P269 -C282 0.402519750123736 P153 -E184 0.394634165743628 Q270 -D283 0.393133466169599 E176 -K182 0.389875904639639 L177 -K182 0.365711062244982 V274 -V279 0.34511818405525 I142 -G189 0.342144144554654 P138 -Q143 0.323878483126504 R141 -V146 0.31150684209346 C282 -V288 0.308258711766927 P269 -V281 0.299406593743048 K275 -S280 0.290021792281505 C282 -G287 0.279279444775931 A145 -G189 0.273588960044897 M149 -G186 0.271134404681358 V146 -P190 0.270809546106522 G272 -V281 0.263203017475781 V146 -E193 0.260090868635874 P269 -D283 0.258727611424382 Q150 -P190 0.256595618404878 G287 -F292 0.254673977477006 S137 -A144 0.252296144198245 S137 -G189 0.250700972803578 D196 -V274 0.250277197922816 P153 -H181 0.240426411190501 P153 -L183 0.238704650126859 L183 -P190 0.237821996693837 A185 -R192 0.23197657739073 D196 -K275 0.226573822965907 L139 -P190 0.225269837909803 P153 -T179 0.225041668342085 V288 -C293 0.224494006591213 E291 -I296 0.221959981180738 Q270 -V281 0.219856558325249 Q270 -S280 0.210840722400722 I142 -V191 0.208887753013032 R141 -M149 0.207022858615315 M149 -R192 0.199810111789996 Q270 -G285 0.198045322005022 M149 -L180 0.193165784474936 V197 -L277 0.191402264462113 V197 -G271 0.190901755047517 A185 -E193 0.188739465060292 D196 -V279 0.182789537755895 P138 -P190 0.182626912569341 S137 -I142 0.179172382699981 R194 -D273 0.178002033569167 Q143 -L148 0.173817033197851 Q150 -R194 0.166918037988546 A144 -E193 0.162738210826754 L178 -E184 0.160487851071217 G189 -R194 0.160471441169383 A267 -V281 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