[Mon Aug 29 18:15:34 2016] >Input file: TMQ8XR87M1G.pdb >TM segments: 116-139 MAIDEN score = -10.0632 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- G126 -Y134 0.352663123216973 V130 -V135 0.235533133849312 G118 -G126 0.171925727290093 G131 -R137 0.124885890478243 S127 -V135 0.113004349225757 G131 -W138 0.107794893937518 V130 -R137 0.104527653061609 G118 -S127 0.0815029446897257 V121 -S129 0.0691375140566448 L123 -G131 0.064071544224066 G125 -P133 0.0550655847591663 G122 -G131 0.0425203537605059 G122 -S129 0.0325371178993841 L117 -G125 0.0293814590864487 L120 -F128 0.0251148393567906 F128 -A136 0.024457173805656 G131 -F139 0.0240467614913893 G125 -T132 0.0206610324203913 G126 -P133 0.0177413808275528 S129 -W138 0.00695661582422069 M119 -F128 0.000866587520579776 G122 -V130 -0.000432536803618877 V121 -G131 -0.00448045967894473 V124 -S129 -0.00806464209675584 S127 -T132 -0.0085480124718158 G118 -F128 -0.0117867471044533 V121 -V130 -0.0237568851828924 S129 -Y134 -0.0272556438657627 L116 -G122 -0.031781620592457 V124 -P133 -0.0397329138594475 L116 -V124 -0.0402711742241468 V130 -F139 -0.0454667596890888 S129 -A136 -0.050650489825987 V124 -Y134 -0.0646273429744535 S127 -A136 -0.0654938168461028 T132 -F139 -0.0698834005927917 F128 -W138 -0.0742446631689448 S129 -R137 -0.0745141426474616 V130 -W138 -0.0793229535663751 V124 -T132 -0.0828002543724695 G118 -V124 -0.0837775456486671 G126 -V135 -0.0887132127374137 L123 -T132 -0.101713924246892 G125 -V130 -0.102209540259803 L117 -G126 -0.103117843009704 L116 -G125 -0.103267596553819 G125 -Y134 -0.108680373095609 G125 -G131 -0.11163242586827 Y134 -F139 -0.119797500566432 M119 -G126 -0.122531665639048 M119 -G125 -0.127166275147366 V124 -G131 -0.13915539308229 L120 -G125 -0.140147057901153 F128 -R137 -0.144540487563326 L120 -S129 -0.151318924554872 G122 -S127 -0.170973486867717 L120 -S127 -0.171004678170829 F128 -P133 -0.173588047298282 G118 -G125 -0.177118294271861 F128 -Y134 -0.179315924309495 M119 -S127 -0.17935197006371 L116 -L123 -0.180037257558641 L123 -V130 -0.182819565374311 G122 -F128 -0.188858801751387 S127 -Y134 -0.194925986937596 L123 -S129 -0.198881870515809 T132 -R137 -0.203191747969528 V121 -S127 -0.210411431976908 G126 -T132 -0.220773921732383 V121 -G126 -0.23056306217965 P133 -F139 -0.254846866068812 L117 -V124 -0.263222910797621 S129 -V135 -0.271292009488589 G126 -G131 -0.275020650517664 T132 -W138 -0.277108997196053 V121 -F128 -0.277401473531823 S127 -P133 -0.282695457582349 L120 -G126 -0.309789474663071 F128 -V135 -0.31796204426271 V124 -V130 -0.320172587046599 L117 -G122 -0.321736465843301 M119 -V124 -0.35496829177747 V130 -A136 -0.366650884585934 L123 -F128 -0.378183060446954 G131 -A136 -0.379880731105849 P133 -W138 -0.396116784255867 G118 -L123 -0.412010401734573 L116 -V121 -0.437016464356541 L117 -L123 -0.45880172235973