[Mon Aug 29 18:18:13 2016] >Input file: TMQ8XSQ5M1G.pdb >TM segments: 99-147 MAIDEN score = -12.4135 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- T113 -F128 0.828812472172993 A117 -F128 0.675878165999531 L114 -F128 0.528807566622585 A117 -S125 0.397939219838606 A117 -T123 0.384461730306145 A117 -I127 0.365601817823213 L104 -A136 0.362267579732682 M138 -G145 0.307916857767709 A119 -S125 0.304134562226721 A118 -S126 0.303090646520396 L114 -A119 0.299287887171891 G141 -L146 0.288482008367712 A136 -G142 0.282239421730974 T113 -I127 0.281483856523671 G112 -G124 0.274494118476086 S140 -A147 0.273929935276877 S106 -G112 0.268742670115389 L120 -S125 0.24910270288283 T113 -T123 0.241655560453966 G141 -A147 0.239965907872755 L102 -P109 0.23338801739899 P109 -S133 0.22939326166077 L116 -P130 0.22526956770683 L116 -G122 0.22436992196858 V121 -S126 0.209426158406636 L104 -V135 0.208979631423754 L116 -G124 0.208041761696723 V135 -R143 0.19904892428981 F111 -A117 0.193581809664069 P109 -L116 0.183792477467372 L104 -G141 0.179249010218602 L103 -S140 0.172531628446677 G122 -H129 0.17223833208469 G101 -M138 0.170672382365796 S106 -S133 0.167461014832575 G122 -I127 0.167230211242021 G101 -G141 0.16193688795167 E131 -A136 0.159665904659947 A118 -G124 0.158526429185942 L114 -T123 0.156921729898015 A108 -R134 0.154353742672052 L114 -H129 0.145904859991575 V121 -I127 0.143809996419563 L114 -G122 0.137127335896524 T113 -S133 0.134762645486894 A136 -A147 0.133208365700201 L116 -I127 0.127960200408202 P109 -A136 0.125630525283917 R137 -G145 0.125492304476676 G101 -R137 0.12059746269499 L114 -S126 0.115230910634707 A108 -S140 0.114507516059973 A117 -P130 0.113645036410063 A108 -R137 0.107705290667583 R137 -A147 0.106854184535248 A119 -I127 0.106454196223784 A118 -P130 0.105056697883915 A108 -P130 0.100312135026311 V107 -S132 0.0997221084822244 V135 -S140 0.0968077835848451 A118 -H129 0.0966566332927501 G142 -A147 0.0962827772625108 L114 -P130 0.0959378974515533 T123 -H129 0.0933232233739278 L99 -V107 0.0915186723707673 N110 -E131 0.0911650421725385 V107 -L114 0.0903684233592923 S106 -V135 0.0899975551815366 A118 -E131 0.0859620647655248 V135 -G142 0.085185150796541 S106 -T113 0.0848424786899848 V100 -A108 0.0824450756395287 N110 -L116 0.0821297629979956 G112 -S126 0.078578500173127 A119 -S126 0.077627383012514 V107 -R134 0.0769035731065106 A108 -A139 0.0761451541804452 A117 -S132 0.0757512743548987 V135 -L146 0.0738142419320968 A108 -I127 0.0736341977494517 G101 -G142 0.0730456536457098 G124 -P130 0.0725814446835358 L102 -F111 0.0676944755547213 V107 -T113 0.0676490686859373 L114 -I127 0.0672512240634537 S140 -L146 0.0671742072544195 I127 -S133 0.0652675135504615 M138 -H144 0.0651978697781308 F111 -H129 0.0645292071755641 V100 -M138 0.0639547335894717 P109 -E131 0.0608208123136222 L103 -M138 0.0600228338653093 G124 -S132 0.0595140985333975 L99 -G141 0.0593602954651331 S133 -S140 0.0536622241152203 V100 -R137 0.0531719122225188 V107 -R137 0.0527216299013451 G112 -L120 0.0509909446726846 L114 -S133 0.0504005837776298 G112 -S125 0.0489297581865014 L115 -T123 0.0481241382385402 A108 -A118 0.0477594412552027 R137 -G142 0.0473691009941755 M105 -L115 0.0473306806805263 M105 -S140 0.0462230149420122 M138 -L146 0.0454604748048806 A136 -G145 0.0443757727396106 M105 -A139 0.0407431177775788 F111 -V135 0.0400060730744873 S126 -E131 0.0388142999338683 G112 -S132 0.0381150727167445 M105 -V135 0.037361284172889 L104 -S133 0.036013546183022 F111 -A136 0.0359475520654708 G112 -S133 0.0354162386410283 G112 -H129 0.0334211861548579 A108 -L116 0.0331144811136723 M105 -N110 0.0329726988237935 T113 -A136 0.0322211324847533 L115 -S125 0.0321680536282184 S126 -S132 0.031658454323459 L102 -A136 0.0310854824430074 R134 -S140 0.0296876289572869 S106 -A136 0.0271180481803968 L99 -A108 0.0262694560773902 P109 -F128 0.025188298205594 A119 -F128 0.0245475889966018 L102 -G141 0.0241057628961496 G101 -V135 0.0221808683380704 S132 -M138 0.020993377909182 M105 -T113 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