[Fri Aug 26 16:26:10 2016] >Input file: TMQ8XT61M1D.pdb >TM segments: 445-461 MAIDEN score = -3.7920 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V452 -R457 0.429860441838475 H447 -D454 0.373314177181776 H448 -S456 0.310341855171762 H448 -D454 0.286050354614248 R451 -R460 0.174781045657712 D454 -T461 0.160733750814875 D454 -V459 0.15079711016055 H447 -A455 0.110514282754908 R451 -R457 0.10467257344059 A455 -T461 0.0949136741504826 R451 -V459 0.0741726345692801 W446 -D454 0.0673262154489125 A445 -A455 0.0650664176807454 V452 -R460 0.0630728533857887 V449 -R457 0.0538028343323628 W446 -V452 0.0517572177502057 C450 -A458 0.0189056334858191 W446 -R451 0.0176318270745 C450 -V459 0.00811772684360523 V449 -A458 -0.00829652031594108 H447 -V452 -0.0160501387178458 A445 -I453 -0.0174578100680467 D454 -R460 -0.0177994509635262 H448 -R457 -0.0199612875239219 H447 -S456 -0.0259212227187766 I453 -T461 -0.0420894525761845 A455 -R460 -0.0451808325813943 R451 -S456 -0.0501654840955883 W446 -A455 -0.0994951907502601 R451 -A458 -0.104901712903919 V449 -D454 -0.127306941191861 H448 -A455 -0.142262950216098 A445 -D454 -0.16974626063611 A445 -R451 -0.195232370196974 I453 -R460 -0.218039098422373 A445 -C450 -0.237310112507275 S456 -T461 -0.238721502407595 I453 -A458 -0.258093670416454 V449 -S456 -0.272933605678552 H448 -I453 -0.277949342119717 W446 -I453 -0.30561056956445 V452 -V459 -0.339860155880726 V449 -A455 -0.348851017623299 A445 -V452 -0.349575914547182 V452 -A458 -0.351474733895963 C450 -A455 -0.363481499810122 C450 -S456 -0.375823539404737 I453 -V459 -0.377409077195599 H447 -I453 -0.391087410496218 C450 -R457 -0.619717539607479