[Fri Aug 26 16:27:11 2016] >Input file: TMQ8XTH0M1D.pdb >TM segments: 13-39 MAIDEN score = -9.0330 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V26 -A31 0.632403715948553 R34 -V39 0.19571069281635 E16 -L21 0.184330429760145 A22 -I30 0.159384460819636 A22 -L27 0.157327700185881 V19 -V26 0.15386395322785 A22 -A31 0.133516838949564 L18 -V26 0.128892101198326 T29 -F36 0.112913948292109 L21 -L28 0.101848210676971 V24 -V32 0.0993880417314532 T29 -S37 0.0977256314775483 V19 -L27 0.0892053772548245 L14 -L21 0.0887623232953443 V20 -L28 0.0750428334846385 I15 -V26 0.0740640689270102 V26 -R34 0.071570303670796 V20 -I30 0.0713848075177073 I15 -A25 0.0627650383161376 A25 -R34 0.0604513601426269 V26 -P33 0.0601628915843089 E16 -A22 0.0587633631155864 L17 -A25 0.0488135766704008 A31 -V39 0.04575689442912 L18 -L27 0.045456830341287 I15 -V24 0.0437991034339875 L21 -T29 0.0341909759603931 A25 -V32 0.0337135935880783 I23 -A31 0.0320340708067444 L14 -I23 0.0283019181673652 T13 -A22 0.0215297393543743 E16 -V24 0.0168229146459983 I30 -S38 0.01297511889139 L21 -I30 0.00781954148977704 L28 -F36 0.00466989935739903 I30 -S37 -8.86593123947677e-05 V24 -T29 -0.000442469482451635 L27 -S37 -0.000806715402513081 L28 -S38 -0.000838977643360946 V26 -V32 -0.00757433761961224 A25 -P33 -0.0112301640161681 L17 -A22 -0.0288088195363212 T29 -S38 -0.0307420729272718 E16 -A25 -0.0307840144698969 A31 -S37 -0.0341894417931048 V32 -S37 -0.0497391075387889 L14 -A22 -0.0571911335545958 V24 -A31 -0.069385232316602 T13 -L21 -0.0714041246763841 V26 -Y35 -0.0761381599234013 T13 -V20 -0.0763483169008787 T29 -R34 -0.0768085813582076 L27 -Y35 -0.0810847088470852 L18 -I23 -0.083796042740433 P33 -S38 -0.091360657359 I23 -V32 -0.0974446777806408 V32 -V39 -0.102027600469617 L17 -V26 -0.104672933682984 V19 -L28 -0.104893465409301 L27 -F36 -0.105264717757644 V19 -I30 -0.123106237670484 I30 -Y35 -0.123642647675972 L14 -V20 -0.129774154986409 T29 -Y35 -0.133028489773742 V20 -T29 -0.139386488309424 V19 -T29 -0.142066338145594 L14 -V19 -0.142071551294958 T13 -L18 -0.147514365759099 A22 -T29 -0.15287366640966 E16 -V26 -0.153724847964191 V20 -V26 -0.158013591715426 L27 -P33 -0.173257231557544 I15 -I23 -0.175607556800178 L28 -Y35 -0.178097171396585 A22 -L28 -0.178525697513322 L17 -V24 -0.178814693339943 L28 -S37 -0.186632170896551 E16 -I23 -0.19386657225012 A31 -S38 -0.196514862257633 I15 -V20 -0.198254430713213 V19 -V24 -0.201729441717632 L27 -R34 -0.202920722219256 L21 -L27 -0.205453229157237 A25 -A31 -0.218823656990522 P33 -V39 -0.219834472616056 I30 -F36 -0.220989516850478 L18 -A25 -0.224994631724794 V20 -A25 -0.233592496063881 L18 -V24 -0.236515604736359 V20 -L27 -0.240524851643983 I23 -I30 -0.243536728687292 I15 -A22 -0.26652582716922 T13 -V19 -0.267416123906678 L28 -R34 -0.27058375467834 V19 -A25 -0.278350768396307 L28 -P33 -0.295238354350562 L27 -V32 -0.321638293962742 I23 -T29 -0.340134148489529 V32 -S38 -0.359549071273683 I15 -L21 -0.364073853594098 I23 -L28 -0.372300672360899 L21 -V26 -0.375743103409757 L17 -I23 -0.392744388964573 A25 -I30 -0.40395772980864 A31 -F36 -0.453121862075778 V24 -I30 -0.470229989697499