[Mon Aug 29 16:46:22 2016] >Input file: TMQ8XV58M1G.pdb >TM segments: 103-128 MAIDEN score = -5.8641 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L104 -R109 0.596829285585394 E103 -T110 0.318620091459088 L106 -E111 0.307956233094901 H121 -R126 0.302165961814108 T110 -L116 0.237681623089973 N120 -L128 0.216299828292805 Q105 -E111 0.206533101208311 L104 -T110 0.15627506022353 N108 -D118 0.148010234614638 E111 -N120 0.131254134038542 N108 -D113 0.128974761585618 D113 -N120 0.127561417327299 T110 -L115 0.122963677030362 N108 -L116 0.111365211643673 G123 -L128 0.108975970079539 P107 -D113 0.105084732608214 V119 -L128 0.0891285603620884 Q105 -T110 0.0854951819191889 R109 -L116 0.0819935420513694 L106 -A114 0.0658741983733022 L116 -L128 0.0622241663062564 A114 -A122 0.0563493271232822 N120 -G127 0.0561192193495614 L115 -N120 0.055872026253704 L115 -A125 0.0482196009017493 L115 -G123 0.0408980107678221 L106 -M112 0.039869399688945 D118 -G123 0.0323726173317507 E111 -V119 0.0238083185321021 A117 -A125 0.0180727032203203 A114 -G123 0.0110912779760324 D118 -R126 0.00415766488622515 E103 -N108 -0.0107411790056342 P107 -L115 -0.0169032357522294 M112 -N120 -0.0280680487468894 D118 -A125 -0.0316085332510445 V119 -G127 -0.035874105938503 L115 -I124 -0.0491668917214128 M112 -H121 -0.0494844085225115 R109 -L115 -0.0503873428957613 E103 -R109 -0.0528851988558274 D118 -G127 -0.0575825307495599 E111 -L116 -0.0698261729637482 P107 -A114 -0.0699397485619562 N108 -A117 -0.0699631256318634 T110 -A117 -0.078243712542911 L116 -A125 -0.078424941076034 D113 -D118 -0.0790616626897842 L104 -M112 -0.0803180695392296 D118 -L128 -0.0846983364661238 L104 -E111 -0.087420526007024 E111 -D118 -0.0925725522486996 L106 -L115 -0.0950995566196884 N108 -A114 -0.10623025211451 A114 -H121 -0.107374955917451 L116 -I124 -0.119636669503717 A117 -L128 -0.127410053968286 L115 -H121 -0.12810914537643 E111 -A117 -0.130641457279361 P107 -M112 -0.138594341932467 T110 -D118 -0.13999772192984 L116 -G123 -0.147236321640692 A114 -N120 -0.151163157642392 H121 -L128 -0.153885414002947 D113 -A122 -0.155281553828603 E103 -L115 -0.1573320769958 D118 -I124 -0.15884398045914 V119 -R126 -0.163635567631148 E103 -M112 -0.166694208849952 A117 -I124 -0.170409964360021 A117 -R126 -0.18381103607329 N120 -A125 -0.193663196533276 D113 -H121 -0.197469108966975 E103 -E111 -0.211849472519773 M112 -D118 -0.220970988486058 N120 -R126 -0.22376046153296 L115 -A122 -0.2375173890795 A117 -G123 -0.241854574216408 R109 -A114 -0.244384046632915 N108 -L115 -0.253372155599957 M112 -V119 -0.253470079417139 H121 -G127 -0.25578411461852 A122 -L128 -0.272237781794035 D113 -V119 -0.291561092178659 L116 -A122 -0.293731386558085 M112 -A117 -0.295314462001507 V119 -A125 -0.307898120072666 L116 -H121 -0.382668901923119 A117 -A122 -0.389218328779991 A122 -G127 -0.397425194262434 V119 -I124 -0.460583880106325 A114 -V119 -0.462880175343167