[Fri Aug 26 16:40:24 2016] >Input file: TMQ8XVI1M1D.pdb >TM segments: 119-127_ 130-146 MAIDEN score = -0.9840 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L123 -G133 0.177828397794059 K119 -D138 0.149637212256653 E137 -V142 0.123476518560778 K134 -K139 0.101388487919306 E137 -Y143 0.100470377201662 G140 -K145 0.0894504593071289 L123 -L131 0.0624319254264138 D138 -Y143 0.0554681958226393 G136 -V142 0.0508367740141334 L131 -G136 0.0400799518656108 M126 -L131 0.0340966891360459 A121 -G133 0.0311568467242576 M126 -A132 0.0251996063422864 M126 -G133 0.00246232386815226 G136 -F141 0.00141827471268252 S127 -A132 0.00126570977528662 L135 -G140 -0.00379725757674609 K139 -L144 -0.00814266789179818 A121 -A132 -0.00935169770147759 S127 -G133 -0.0188139015577875 G140 -R146 -0.0239322989086211 G125 -A132 -0.0280882249644083 K122 -S127 -0.0417821157397338 K139 -R146 -0.0528838807425718 G133 -D138 -0.0729019552452144 G125 -D130 -0.0775289136171646 L123 -A132 -0.0807974710174815 L123 -D130 -0.091080975263982 D138 -L144 -0.0923740020921481 L124 -A132 -0.112943605644946 K122 -G133 -0.133729607999328 G133 -K139 -0.134252475483609 D130 -L135 -0.135955375641949 K139 -K145 -0.137429400770999 K122 -A132 -0.14659749140226 F141 -R146 -0.150198587786612 K119 -G133 -0.152908695535015 L124 -D130 -0.160663314657137 E137 -L144 -0.164546982619635