[Mon Aug 29 17:00:44 2016] >Input file: TMQ8Y030M1G.pdb >TM segments: 56-96 MAIDEN score = 20.9865 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- D77 -G83 10 M78 -G83 10 M78 -L84 1.17186590446823 L57 -T87 1.14341182386537 M78 -I85 1.06505295866622 A89 -V94 1.04055215690711 I85 -V96 1.00562300467757 K63 -A81 0.917856401732606 K58 -A81 0.908544304349591 T79 -L84 0.768999451149501 V59 -F80 0.753271864553312 V59 -L84 0.729768176221286 V59 -L64 0.729372165243819 L57 -V91 0.560273680174953 F80 -R86 0.491221890991645 F80 -T87 0.473334751383554 P76 -L84 0.466981086279858 R90 -V96 0.463067984776133 P76 -I85 0.461463423108664 L57 -R90 0.456839643990627 V67 -A74 0.399635737099101 K58 -F80 0.388111051741137 F80 -I85 0.369812996240666 T79 -I85 0.358044134238767 P61 -S69 0.329421334358623 V67 -L75 0.326477758632004 V67 -P76 0.3177173267366 L57 -R86 0.317143795086856 Y88 -Q93 0.297520289286577 S73 -G83 0.296408733211629 P61 -T87 0.289711905772359 A66 -K82 0.270052751113938 M78 -T87 0.269524291299863 S69 -P76 0.258468884138894 L65 -D71 0.251343437062924 D71 -D77 0.251019566238629 P61 -L84 0.248907769132269 M78 -R90 0.247370889301262 L84 -A89 0.245496982139547 L64 -T87 0.239679653477846 K58 -T87 0.234884297604923 A60 -A81 0.230203999373126 F80 -A89 0.224805897803084 K58 -Y88 0.213445129144425 V72 -D77 0.212401516272979 L64 -L84 0.211246276002798 V67 -V72 0.205174257410124 P61 -G70 0.203593479588861 K58 -K63 0.20104570667672 V59 -T87 0.193077474866662 A60 -T79 0.191289137338066 R56 -V91 0.181018073211524 A60 -E68 0.17908937185056 D77 -R90 0.17903242908722 G70 -L84 0.176801300668899 R56 -Y88 0.176637386909629 K63 -L84 0.17641615105046 K63 -Y88 0.176293121170585 L64 -S73 0.16909468762382 L57 -K82 0.168486726404387 K63 -T79 0.167785361562249 A60 -Y88 0.167543505766586 K58 -R86 0.164941240102703 T79 -T87 0.155469822507216 G70 -G83 0.150863735629097 A74 -I85 0.150262362625615 K63 -T87 0.145212498293579 A62 -D71 0.139052967896009 V59 -D77 0.137737770855272 K82 -Y88 0.133525866134585 K58 -L92 0.131556525851009 P61 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