[Fri Aug 26 17:04:37 2016] >Input file: TMQ8Y1L0M1D.pdb >TM segments: 51-87 MAIDEN score = -0.7865 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L64 -R69 0.420587427636012 K53 -R59 0.330325666153494 L72 -E77 0.307384476343257 K53 -W60 0.251436016355549 V74 -V79 0.243266744627803 V79 -L84 0.217036718018871 A55 -S61 0.214975851587079 G76 -D83 0.197657817693212 D75 -A82 0.195461077198789 E77 -A85 0.19177312405312 A78 -D83 0.190415115870898 L65 -V70 0.181262075663512 A73 -G80 0.143658634016181 V74 -A82 0.137407431826124 R59 -A66 0.134494570991862 K53 -Q58 0.128042580794709 E77 -L84 0.125676650181513 R62 -F68 0.116307404335156 A78 -A85 0.112579178539942 R52 -I57 0.112050893832201 A78 -A87 0.109934311871726 A55 -R62 0.10583751956842 W60 -L65 0.103221572193504 W60 -A66 0.0993834785784866 V70 -G76 0.0900376269356422 Q58 -R63 0.0798294798200114 Q58 -A66 0.0794683980965658 A78 -G86 0.0790014410742068 S61 -L67 0.0784260776565304 S61 -R69 0.0744800261043459 L72 -V79 0.073735405464152 R54 -R62 0.0722420160515007 L56 -R62 0.0720193014111645 R69 -V74 0.0719564786459646 E77 -A82 0.0706130928268984 L65 -T71 0.0655403296162697 G76 -L84 0.0625183362740538 A66 -L72 0.0591456362240119 L56 -L64 0.0562786414923053 V70 -D75 0.051692269188667 G76 -A87 0.0497767429637479 G76 -A85 0.0494682276714919 A51 -I57 0.0433574748689203 A73 -A82 0.0423775312400871 R59 -L65 0.0404542627189937 I57 -R63 0.0383692439990981 R54 -R59 0.0362065197235282 A66 -V74 0.0337777144079636 V74 -L84 0.0234116798793476 V70 -E77 0.0166909727521218 R63 -F68 0.0129291806327942 S61 -F68 0.0113959192423 E77 -G86 0.0104621584083535 A51 -Q58 0.00967779285280379 R63 -R69 0.00767579855514988 G80 -A87 0.00302020168854122 A73 -Q81 -0.000354876529021553 R52 -R59 -0.00101716492517712 A78 -L84 -0.002070912107766 R62 -L67 -0.00282321461724244 R54 -W60 -0.0036010471615433 L64 -T71 -0.0122968311178013 V79 -A85 -0.0193510356819786 Q81 -G86 -0.0205734430420847 L72 -G80 -0.033735372786192 D75 -D83 -0.0362469099075406 R54 -S61 -0.0429567694412447 S61 -V70 -0.0436503460531186 V74 -Q81 -0.047138332474133 T71 -G80 -0.0474070389818124 Q58 -L65 -0.0502522521180486 V79 -G86 -0.0566788829426219 T71 -E77 -0.0637266303837087 Q81 -A87 -0.0639474384824881 L56 -S61 -0.0643281891184699 D75 -Q81 -0.0681404658105098 K53 -S61 -0.0702634157597313 L72 -A78 -0.0721457005497586 A55 -W60 -0.075292922097862 D75 -L84 -0.0859237813465598 L64 -V70 -0.0865090348285662 R62 -R69 -0.090709671362195 D75 -G80 -0.0918789876071568 T71 -A78 -0.0997884543224847 A82 -A87 -0.10197148684146 G80 -A85 -0.10496572508337 A66 -T71 -0.105807196320035 G80 -G86 -0.114491664040318 E77 -D83 -0.120207163599783 Q58 -L64 -0.121511727653393 T71 -G76 -0.124923678116564 T71 -V79 -0.13375532945104 V79 -A87 -0.14150815126929 L67 -L72 -0.145971550341431 A51 -L56 -0.149230769898642 R52 -Q58 -0.149598133698889 I57 -L64 -0.156495327458938 W60 -R69 -0.162049869612358 R52 -W60 -0.164412399181763 L56 -R63 -0.166329803115673 A73 -A78 -0.171587266209376 A51 -R59 -0.185690278613059 G76 -Q81 -0.188859103856307 V74 -G80 -0.193209875793303 E77 -A87 -0.235988255388826 R59 -L64 -0.262752746005702 G76 -A82 -0.266913997777372 V74 -D83 -0.278413880498477 R63 -V70 -0.279670326039516 A73 -V79 -0.354484974033582 S61 -A66 -0.393595176352051 I57 -R62 -0.395496093279242