[Mon Aug 29 17:05:05 2016] >Input file: TMQ8Y1V4M1G.pdb >TM segments: 307-329 MAIDEN score = -0.8185 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L314 -V321 0.730244061730166 W315 -V321 0.591837215311006 P316 -V321 0.389001353920096 W315 -A320 0.37230253333219 L314 -A320 0.364595815886833 A312 -A323 0.326888299679191 L314 -G324 0.294996853355675 D317 -L322 0.284368876545703 D317 -G324 0.266156540358858 A323 -G329 0.236077702983502 A320 -A326 0.235087624611788 L313 -P318 0.223275610177005 A312 -A320 0.213626584647177 L313 -V321 0.190927971820407 V321 -M328 0.166147477886645 A312 -G329 0.161636831452177 G307 -A312 0.153911475923765 A312 -G324 0.118193840412935 L322 -L327 0.113709447398762 A319 -A326 0.107626506966054 A312 -P318 0.105286527338343 A319 -G329 0.10240122072284 I309 -L327 0.0989608710783152 L311 -A326 0.0973433746211105 P316 -A323 0.0921912294042468 L314 -A326 0.0755342949408995 L310 -A326 0.0738281080382994 L311 -L327 0.0709876314833426 L313 -A326 0.0702329674545004 V321 -L327 0.0687188253963429 I309 -F325 0.0614462563774714 L314 -M328 0.059342991925891 L322 -M328 0.048460725656839 P316 -G324 0.0469431525173547 A312 -M328 0.0444966436593419 L313 -A319 0.0441046068068245 L310 -F325 0.0348828327918962 L313 -A323 0.032150459291326 A319 -M328 0.0245817804481949 A312 -L327 0.0187409679670338 L313 -F325 0.0170243005630328 A320 -M328 -0.000224163515183839 L311 -V321 -0.00115816536458091 L310 -G324 -0.0053504011350789 L314 -L327 -0.0109811993257214 A320 -G329 -0.0225302330071742 L311 -P316 -0.028791054523766 A312 -A319 -0.0299139592283604 P318 -A326 -0.0309590285745727 D317 -A323 -0.0322926176202714 A312 -D317 -0.0421361835226524 A320 -L327 -0.0458735023643939 A312 -L322 -0.0509778617722647 P318 -F325 -0.0534807025580979 L314 -A323 -0.0736026470845017 A319 -F325 -0.0883958546877857 A312 -F325 -0.0892634476613923 A323 -M328 -0.0966996093574686 L311 -F325 -0.098745995759034 I309 -A326 -0.103845520893792 I309 -G324 -0.10898634021182 D317 -F325 -0.120460477864321 P316 -F325 -0.127144027714174 L322 -G329 -0.136565344498324 L311 -A323 -0.14893446158927 A312 -A326 -0.149523956725964 L313 -L322 -0.150979007817767 L313 -L327 -0.153280167637897 L310 -L327 -0.154631300968838 V321 -A326 -0.160614596881022 W315 -F325 -0.160986666290386 W315 -L322 -0.161763807172316 V321 -G329 -0.162890452546833 L311 -A320 -0.166080932385153 L311 -G324 -0.176148682006409 L314 -F325 -0.179730853885427 P318 -G324 -0.216175613381136 L314 -A319 -0.221390646188185 W315 -G324 -0.222754738528501 G324 -G329 -0.2265903476014 L314 -L322 -0.245001016108549 W315 -A323 -0.255856700766179 L313 -A320 -0.295301773920896 A312 -V321 -0.366788238970587 L313 -G324 -0.421240257620213 P318 -A323 -0.433664904173121 A320 -F325 -0.4361674170774 A319 -G324 -0.448960620718459 P316 -L322 -0.532983966308206