[Mon Aug 29 17:05:31 2016] >Input file: TMQ8Y200M1G.pdb >TM segments: 127-142_ 363-400 MAIDEN score = -8.8293 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- R367 -C372 0.702507351508788 M370 -A378 0.678356748561542 L373 -A378 0.567528868930863 A129 -E134 0.551059160005554 M368 -L373 0.485974287187214 F130 -T135 0.434222062932728 A374 -I379 0.39444335618962 N385 -K390 0.301312880482431 A375 -S380 0.282137279262855 L131 -G136 0.270140246472636 C372 -R377 0.260104807700402 A389 -G397 0.244998307109594 V393 -A398 0.224741923082451 E127 -D132 0.213557583833959 M368 -R377 0.202402770379114 G376 -P382 0.174193929693081 R367 -A375 0.174022469086715 L131 -C139 0.171793487386731 I133 -L138 0.15327965108847 G365 -G376 0.148958235082785 E371 -A378 0.145043722159063 L131 -K137 0.144550659941162 G387 -G397 0.142541909865087 C372 -S380 0.138416662655886 I133 -D140 0.138381106010804 N385 -L391 0.128615839154225 I379 -N385 0.127834070406769 D132 -K390 0.1266597601966 K137 -A142 0.125653665869683 E127 -G136 0.124852612778175 R394 -Y399 0.123309864739937 W366 -L373 0.117305633048525 R377 -P382 0.116534343813348 A374 -L381 0.115143382052784 V386 -R394 0.109163904633718 L373 -L381 0.108062996718359 R364 -C372 0.106546409635537 R367 -A374 0.105050706251669 W366 -G376 0.104605246142246 I379 -G387 0.104002183054466 G376 -L381 0.103753856013165 L381 -L391 0.0995905505412429 Q128 -K137 0.094862249888223 E371 -R377 0.0920127250369003 C372 -I379 0.0902892166895373 M388 -T396 0.0895143470456756 L131 -D140 0.0840673284809457 G136 -L141 0.0821029272961189 W366 -A375 0.0798401016066537 A374 -P382 0.0762837135971495 S383 -A392 0.0725742428962315 Q128 -R394 0.0723248101763605 S384 -A389 0.0683446078379202 F130 -C139 0.065951542312181 L131 -L141 0.0652169741331479 C372 -A378 0.0648839916395065 L373 -I379 0.0635655192552802 A374 -S383 0.0625287152054819 A392 -A400 0.0623351470879463 F130 -D140 0.0621546409169411 M368 -A378 0.057023174953712 M370 -P382 0.0533874150400877 L369 -I379 0.0528334987522407 D132 -K137 0.0526940525155917 S384 -A392 0.052164216961347 N385 -R394 0.0448911355183572 F130 -K137 0.0413404165744358 N385 -V393 0.0399076645114802 Q128 -G387 0.0362473967514063 A129 -L138 0.0362014689923842 L381 -A389 0.0340541137038306 I379 -S384 0.030317160381367 V386 -A395 0.0275564215410924 S383 -L391 0.0273113593486234 L131 -G387 0.0236476427970733 A375 -L381 0.0216366553091136 A389 -R394 0.0206570944007134 A378 -S384 0.0194434579612532 G365 -C372 0.0100711713987638 L373 -P382 0.00900315057496037 G387 -A395 0.00865581171680763 E127 -K137 0.00490496015967423 G365 -L373 -0.00328965217969923 G136 -L391 -0.00719529207497782 E371 -S383 -0.00918011707372279 I133 -A142 -0.0148418312376291 S380 -A389 -0.0163050574400172 R367 -G376 -0.0237807172152901 E134 -L141 -0.0249344019998121 S380 -K390 -0.0252712635781149 G365 -E371 -0.02744086507863 L381 -G387 -0.0286130445076269 D132 -L391 -0.028886041685289 Q128 -G136 -0.0293306847161611 P382 -G387 -0.0311587594427535 W366 -C372 -0.034969563542349 L391 -A400 -0.0352021358624075 K390 -A395 -0.0361477208546273 K390 -A398 -0.0371880035751177 S384 -V393 -0.0380785213454113 K390 -Y399 -0.039725553162131 A392 -Y399 -0.0423168835785348 A389 -A398 -0.0430710536757499 G365 -A375 -0.0435916545163151 A374 -S384 -0.0452770939291351 R377 -S384 -0.045788344072871 A378 -N385 -0.0480725829276525 G387 -T396 -0.0512468447474781 L131 -R394 -0.051460577243624 S383 -K390 -0.0517518120627944 R377 -S383 -0.057951957570936 M370 -G376 -0.0586813005335434 T135 -A142 -0.0588258633865415 E371 -S380 -0.0613957687809579 K390 -G397 -0.0615316256957077 N385 -A392 -0.0627457065695598 E134 -A142 -0.0687466187862709 I379 -M388 -0.0704093913811867 I379 -V386 -0.0707813471782366 Q128 -L138 -0.070928161593486 L373 -S383 -0.0718743475404242 M370 -S380 -0.0738478976990469 S380 -M388 -0.0740426402260523 L381 -K390 -0.0747559906504582 M370 -S383 -0.0751037779022825 G387 -R394 -0.0765350165176137 W366 -A374 -0.0795640159253566 D132 -L141 -0.0802134411866449 Q128 -T135 -0.0834606625454386 M388 -A395 -0.0845181425448196 D132 -R394 -0.0861619583808237 I133 -L141 -0.0888984090208442 M370 -L381 -0.0926016226493909 L391 -Y399 -0.0935497829541538 Q128 -L391 -0.0958474755127958 E127 -E134 -0.104828362858153 A129 -T135 -0.107292471742225 S384 -R394 -0.11151118028981 L369 -G376 -0.115300142003803 G136 -A142 -0.116975764468816 E134 -D140 -0.117268977078693 R367 -A378 -0.117961679894366 A389 -T396 -0.119284352159429 P382 -K390 -0.121205208969024 L373 -S380 -0.124899231281864 A129 -G136 -0.125491250715577 S380 -N385 -0.126895440646459 T135 -D140 -0.127444897287103 Q128 -E134 -0.129539686712007 R367 -L373 -0.129926209020926 L369 -R377 -0.131814645712736 S384 -K390 -0.134610730050946 E134 -C139 -0.137598921078387 S380 -G387 -0.140867782527528 D132 -A142 -0.14315322885959 P382 -L391 -0.143982534018346 D132 -A398 -0.146989239225132 E371 -I379 -0.147568410007428 S383 -M388 -0.151258048248245 P382 -M388 -0.151877943854283 L131 -L391 -0.152497757061752 M368 -G376 -0.15857872558771 K390 -A400 -0.158659649772338 L369 -A378 -0.160999971540873 D132 -A395 -0.162860318365782 L381 -V386 -0.16703580696522 E371 -G376 -0.168178762093901 P382 -A389 -0.169925409993951 F130 -L138 -0.173450215723715 G387 -V393 -0.175624689492089 D132 -D140 -0.179251049262462 M388 -G397 -0.185013667202572 E127 -T135 -0.194282075959073 W366 -E371 -0.194545129883844 E127 -I133 -0.195954439021496 A378 -S383 -0.1967443897299 A395 -A400 -0.197752636913899 A389 -A395 -0.19936724976726 Q128 -K390 -0.199810624129986 S383 -A389 -0.19993300639532 M368 -A375 -0.201952398482488 D132 -L138 -0.202631469133312 A392 -A398 -0.207435367847758 R394 -A400 -0.210844772300431 L391 -A398 -0.215380022571786 F130 -G136 -0.217717941740103 M370 -R377 -0.218252771927367 M368 -A374 -0.230133052260461 T135 -L141 -0.241134891721942 S384 -L391 -0.247662270190639 M388 -R394 -0.250549716984641 K390 -T396 -0.254746184320051 L369 -A375 -0.2594128065323 I133 -C139 -0.267257950239329 A129 -K137 -0.280182726606731 V393 -Y399 -0.299803825514842 L391 -T396 -0.30260102658725 L369 -A374 -0.302910356619301 Q128 -I133 -0.329692196603131 S380 -V386 -0.332310956740925 L391 -G397 -0.335885362977701 M388 -V393 -0.337851477150779 M370 -A375 -0.338423251554733 A392 -G397 -0.339891381994161 V386 -V393 -0.353119500289383 V386 -A392 -0.362043590668581 V393 -A400 -0.365164305792357 D132 -C139 -0.375712953246992 L131 -L138 -0.391757577448276 M370 -I379 -0.406793400389092 V386 -L391 -0.450296807817261 L381 -M388 -0.46197744169688 G387 -A392 -0.481539787317756 A374 -S380 -0.497242852555646