[Mon Aug 29 17:09:48 2016] >Input file: TMQ8Y3F9M1G.pdb >TM segments: 310-351 MAIDEN score = -0.7544 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L312 -R317 1.71318030947717 L326 -L332 1.04401609692524 D328 -A335 0.793672430761263 L312 -V318 0.720649550695287 L327 -L332 0.676278232042839 G313 -V318 0.6593784186186 L330 -A335 0.618221418116174 D329 -A334 0.508811422502562 L339 -R344 0.507721581698959 L327 -A333 0.469201160412148 A311 -V318 0.44242507622991 A325 -L330 0.432407112513339 G331 -L336 0.368170321279676 L327 -A334 0.355854371178552 L326 -G331 0.351275846458989 V340 -A346 0.342089106136044 A325 -G331 0.338078983621764 S319 -A325 0.312100299135571 L327 -R350 0.295714282489681 R316 -N321 0.293110979177046 G310 -S319 0.284706328233125 L336 -R341 0.278827271590894 V340 -D349 0.273050750846986 R341 -H347 0.262399251342411 L339 -E345 0.261622603836329 R341 -E348 0.255395723450036 G310 -R317 0.250887777612097 E337 -R344 0.232121076811566 N321 -G331 0.224522821023405 R341 -D349 0.214780139424069 E337 -D349 0.20423225145277 A334 -E342 0.193862274618244 P324 -D329 0.192195910409668 H320 -A325 0.19108764854954 L312 -N321 0.189878797462581 E314 -H320 0.185824483568648 R317 -A325 0.178648308794713 L322 -D329 0.178197815456958 H320 -D329 0.171875327114507 A333 -R341 0.165973180691209 R344 -D349 0.162380964676365 D328 -A334 0.162321653058022 R317 -P324 0.161745997920301 A335 -T343 0.157159939619032 P324 -R350 0.153639640758666 A311 -R317 0.152443747908766 G310 -H320 0.144889864315826 A333 -Q351 0.138433447273592 V340 -E348 0.136872668207524 G310 -L330 0.133046438310623 E337 -A346 0.131908536595085 N321 -D328 0.129029863849544 R323 -A334 0.127810834667142 A334 -A346 0.124911182118693 L330 -L339 0.121205065980086 L332 -E337 0.120927915361712 L338 -E345 0.116332492253179 N321 -L326 0.113200323151419 G310 -R316 0.11132825201915 L322 -L330 0.107746308902181 D328 -H347 0.104175457745705 R341 -R350 0.104053193346918 V340 -H347 0.10071538094094 V315 -H320 0.0980448486011958 D328 -L336 0.0941340196001645 L327 -L339 0.0915403115463467 A333 -A346 0.0892338872336023 R316 -L322 0.0858827477755967 E342 -E348 0.0846131975440094 L312 -S319 0.0796343138142657 V315 -A325 0.0786288345648183 L312 -A325 0.0778220977267408 D328 -R350 0.0748933984342508 R323 -L330 0.0720660939727334 N321 -L332 0.071898694727313 L322 -G331 0.0629908566774802 L312 -L322 0.0511683169434267 G331 -L338 0.0508650120261454 S319 -D329 0.0497689558972791 L336 -T343 0.0486360457464041 G331 -V340 0.0430640435273073 H320 -L330 0.042385777362692 A311 -N321 0.037795722317115 H320 -G331 0.0357413471357125 L336 -E342 0.0341342001283857 L330 -L338 0.0332394114268819 L327 -E348 0.0324044744377949 A325 -L332 0.0314824548428811 A333 -D349 0.0304904324332425 L332 -D349 0.0288363066306874 L338 -E348 0.0263989294959437 L326 -Q351 0.0254691003378857 E337 -R350 0.0235772322073813 L336 -E345 0.0200574059511336 G331 -H347 0.0196885774137732 L326 -D349 0.0192910601962193 L326 -A333 0.0178323185056719 G331 -R350 0.0169546987413733 H320 -L327 0.0152286629530123 D329 -E337 0.0122849109349956 L327 -V340 0.0120840846068533 A335 -H347 0.0119223627353613 A333 -L338 0.0104090608117779 G310 -A325 0.00785554449886061 L336 -R344 0.0073660213335156 R317 -R323 0.00715954430260135 L327 -Q351 0.00056933259191716 H320 -L326 -8.63030796889319e-05 G331 -E348 -0.00145224923768161 G313 -H320 -0.00335397414975452 L336 -A346 -0.00737937041161274 P324 -A335 -0.00892255401315101 V318 -A325 -0.0127134369978643 N321 -D329 -0.0132744736880612 A334 -R350 -0.0142572881506915 E337 -E348 -0.0166915113956325 L339 -E348 -0.0174539356714654 L338 -D349 -0.0177902958805003 L327 -E337 -0.0224076885456199 E337 -Q351 -0.0234573688017091 R323 -A335 -0.0240288916643472 A334 -T343 -0.0251988441895481 D329 -L336 -0.0254416508059143 L330 -E337 -0.0273551073946661 A311 -A325 -0.0281460218162284 P324 -L332 -0.0306116742427829 A335 -E345 -0.0313431599279228 A333 -R350 -0.0321986974614197 L336 -D349 -0.032477727830149 N321 -L330 -0.0355151359076344 N321 -A333 -0.0364292443222205 D329 -A335 -0.0390551328595889 L327 -A335 -0.0392529627240115 A335 -A346 -0.0401304515285079 A334 -H347 -0.0416735896885925 A334 -E345 -0.0438751447910808 R317 -L326 -0.0492035642011835 L327 -L338 -0.0558264073957133 D328 -L338 -0.0591381027914633 A311 -H320 -0.0620965587105147 V340 -E345 -0.062835991639552 A335 -E348 -0.0666360913439978 L312 -H320 -0.0682871194659632 A325 -E337 -0.0716052417464157 V318 -P324 -0.0725122756721315 A311 -D329 -0.0732382491109096 P324 -G331 -0.073761636829069 L332 -E348 -0.0737913672602635 A325 -L336 -0.0748901753119444 L339 -H347 -0.0776762679708098 R323 -R350 -0.0795046475531422 A333 -E342 -0.0798573560624285 G310 -V315 -0.0799983226089598 A335 -D349 -0.0810728047798099 D328 -L339 -0.0838298001282531 L326 -E337 -0.0852916196717024 A311 -R316 -0.0854324454431921 P324 -L336 -0.0864290932936749 G310 -P324 -0.0865299892353851 E337 -E342 -0.0867015035382934 D329 -L338 -0.0867096990129609 L339 -D349 -0.0870498730176117 A334 -Q351 -0.0902632959135694 L336 -H347 -0.0908481676144755 P324 -A333 -0.0909968397766595 P324 -L330 -0.0912049657817828 G310 -D329 -0.100116848541646 A346 -Q351 -0.100252158065607 L322 -A333 -0.102428984074487 R323 -G331 -0.105721359435368 A311 -L330 -0.107891761861259 V315 -N321 -0.108223100500209 G331 -L339 -0.108400733967924 A334 -E348 -0.108586896056966 D328 -E337 -0.111602840636398 E314 -S319 -0.113545957367437 G310 -N321 -0.115631606075802 G313 -S319 -0.11565574750961 R317 -D329 -0.117775690013281 P324 -A334 -0.120725305392092 A325 -A335 -0.120810397582781 L332 -R350 -0.122466366120749 L326 -L338 -0.125413759875402 L332 -L339 -0.127162958302937 S319 -L326 -0.129655185304348 G331 -D349 -0.132077397478766 G310 -V318 -0.133126814254233 A333 -H347 -0.134541799384187 D328 -D349 -0.137903319839191 R317 -L330 -0.139452032064447 R317 -L322 -0.139956214129705 E337 -E345 -0.140571614323286 L338 -T343 -0.143309881027285 R316 -A325 -0.143328816341098 S319 -P324 -0.143987428103259 E342 -H347 -0.144426302460086 L336 -R350 -0.146506230739875 L326 -R350 -0.148177094964666 L322 -A334 -0.150688069026462 A333 -E348 -0.15131479162033 L338 -R350 -0.153098524841278 G331 -R341 -0.153831509703262 A334 -D349 -0.154252950691959 V340 -R350 -0.15634404087856 A335 -R344 -0.156536575338466 L332 -R341 -0.159182537567465 A335 -R350 -0.159922888712578 L326 -E348 -0.162487321739774 A325 -R350 -0.167100924255726 E337 -H347 -0.173218400410309 L326 -A334 -0.173577784444168 H320 -L332 -0.177517602599218 A325 -A333 -0.18071127593139 L336 -E348 -0.183646020515391 A335 -E342 -0.187122051394939 L322 -L332 -0.187517804006526 E337 -T343 -0.194805875270022 L330 -L336 -0.197655251560633 A335 -R341 -0.19891932028199 R323 -D328 -0.201873473680914 R323 -D329 -0.203500765389601 L339 -A346 -0.204449570926842 V318 -R323 -0.205752039687497 L326 -L336 -0.209150876141268 T343 -E348 -0.20993707165812 D328 -E348 -0.228321393859013 L332 -V340 -0.229889410602683 L327 -H347 -0.230866998462258 L326 -A335 -0.232999762866156 A325 -A334 -0.233142115566718 N321 -L327 -0.237578352553191 A334 -R341 -0.24148625432141 L322 -D328 -0.242868215105394 R323 -A333 -0.246782418720931 R323 -L332 -0.246976030239035 L332 -H347 -0.254626783938121 G331 -E337 -0.255512286173264 E342 -D349 -0.266318361303456 A335 -V340 -0.268510802233612 D328 -V340 -0.278578538585293 L338 -R344 -0.283573959080528 A334 -L339 -0.302852078101886 A333 -V340 -0.303820518795063 H320 -D328 -0.306436007676311 L327 -D349 -0.306723374137068 L338 -A346 -0.311566927952701 A333 -L339 -0.316527090595783 P324 -E337 -0.32627470894072 D328 -A333 -0.348357386356921 A334 -V340 -0.370540181676874 L338 -H347 -0.404985571138867 A311 -S319 -0.406069328937722 L327 -L336 -0.413844000668721 L322 -L327 -0.414725310066248 L332 -L338 -0.450147543810448 R341 -A346 -0.499046580835822