[Mon Aug 29 17:13:07 2016] >Input file: TMQ921L3M1G.pdb >TM segments: 41-68 MAIDEN score = -4.3447 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- K48 -K54 0.415496410787696 K53 -E59 0.391295496468867 K52 -I57 0.373109346776547 K49 -E55 0.368476114722177 A41 -K49 0.354021985770567 R63 -K68 0.32760395606403 Q46 -K54 0.299211379059535 E42 -K48 0.276232956566641 K45 -K52 0.256626668952482 I57 -R63 0.225087219725918 K45 -E51 0.22378160485511 E44 -L50 0.211995649151433 E51 -T58 0.169986551730602 E59 -K67 0.168991372017011 T56 -Q64 0.162531222277334 K45 -L50 0.145577284766744 E51 -E59 0.127962356500183 E42 -E51 0.107362113351796 K52 -E59 0.0976842207630915 G62 -K68 0.0871328171529977 K54 -G62 0.0839468270603027 S47 -T56 0.0832334217630266 K52 -S60 0.0828743001382755 E55 -R63 0.0759796819804501 K49 -T58 0.0747055289402665 E55 -S60 0.0602804181744414 K49 -I57 0.0583589043224064 T58 -K66 0.0501157118326407 E59 -K66 0.0440266997724112 I57 -Q65 0.0362782848918526 E44 -K53 0.0345793048301108 Q46 -T56 0.0303441233258102 K45 -K53 0.0293476163467465 L50 -T58 0.0263510119007018 V43 -E51 0.0158327910252307 E44 -K49 0.0136778429430469 I57 -K66 0.00900809387565449 E51 -S60 0.000173287848657333 E42 -S47 -0.00840766677094784 E42 -L50 -0.00988734989756609 S60 -K67 -0.0131148699373069 K53 -A61 -0.0224206119502135 K49 -E59 -0.0241892603997569 E55 -Q64 -0.0273614438850783 S47 -I57 -0.0277738185942722 Q46 -E55 -0.0293314359987353 S47 -K52 -0.0304571715465247 S47 -K54 -0.0333693922179255 T56 -Q65 -0.0349029764908444 T58 -Q64 -0.0383924392895614 E44 -K52 -0.0436680261997742 K48 -T56 -0.0450294462251013 K48 -I57 -0.0477155378779379 S47 -E55 -0.0484010068966009 K53 -S60 -0.0502056033767756 K48 -E55 -0.0513464168276814 S60 -K66 -0.0551119451119832 K54 -S60 -0.0553242608658467 K53 -G62 -0.0566733424033017 A41 -Q46 -0.0568007785643042 S60 -K68 -0.0642732468862395 K54 -E59 -0.0656250341082236 V43 -K53 -0.0771805672980035 E51 -T56 -0.0811474425920911 V43 -K48 -0.0829695505479773 S60 -Q65 -0.0875208430886475 E55 -G62 -0.0882570253126689 A61 -K66 -0.0897200325879437 S47 -K53 -0.0943549986503567 K54 -R63 -0.104449287938937 E59 -Q65 -0.114675641769977 K53 -T58 -0.117822305208338 L50 -E55 -0.12777239034946 Q46 -K52 -0.137965740694139 K52 -A61 -0.141038687986672 L50 -E59 -0.141058241045055 T56 -R63 -0.146202429597403 T58 -Q65 -0.147645350113189 V43 -K52 -0.149016931409167 A61 -K68 -0.149548712044811 E55 -A61 -0.153943203585659 A41 -L50 -0.162297051611643 T56 -G62 -0.181512817691726 E44 -E51 -0.181669846383674 E51 -I57 -0.188782846929254 T58 -R63 -0.199936930494738 V43 -K49 -0.202474466958813 Q46 -K53 -0.209453491242217 G62 -K67 -0.21345106159267 L50 -T56 -0.214703037318898 I57 -G62 -0.21473799072658 E42 -K49 -0.2160422515013 A41 -S47 -0.216469031825699 V43 -L50 -0.256046915100812 Q46 -E51 -0.258189898964979 K49 -T56 -0.267253790135616 K52 -T58 -0.269843367381607 E59 -Q64 -0.269849431830894 I57 -Q64 -0.276937468532127 K45 -K54 -0.312549569440038 L50 -I57 -0.32104331146773 T56 -A61 -0.333850897121863 A61 -K67 -0.356243384777144 A41 -K48 -0.358259622398207 K54 -A61 -0.359159478265876 K48 -K53 -0.359818270232182 K49 -K54 -0.371315031465413