[Mon Aug 29 17:20:36 2016] >Input file: TMQ92KR0M1G.pdb >TM segments: 125-139 MAIDEN score = -5.2069 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- F131 -G136 0.467398483884729 L130 -R135 0.317744661860722 A127 -R135 0.147081431545483 G126 -G136 0.122012156153914 C128 -G136 0.0987756651864835 G126 -A133 0.0745182761972005 A127 -G136 0.0241869943394191 A134 -S139 -0.00430553552322621 A133 -S139 -0.0051255289662232 L129 -A134 -0.00822844844454629 L125 -A133 -0.0136378303924483 G126 -A134 -0.0211032902956527 C128 -A137 -0.0313092431104866 C128 -R135 -0.0436148640528877 L130 -F138 -0.0439471787934558 L130 -G136 -0.0466139411332414 L125 -R135 -0.0492035642011835 L130 -S139 -0.0843187325761812 L125 -A134 -0.0852387887261861 I132 -A137 -0.0888338286362522 L129 -A137 -0.107765145373591 L129 -R135 -0.123246710166978 L129 -F138 -0.125062240024846 G126 -R135 -0.164061391032174 L129 -S139 -0.170597364281033 L125 -F131 -0.172619912707209 A127 -A134 -0.172746073949782 F131 -S139 -0.183127305134966 C128 -A134 -0.199996796580225 L130 -A137 -0.202119103404621 G126 -I132 -0.206102158845095 A127 -A133 -0.22305673561716 F131 -F138 -0.233259050106674 G126 -F131 -0.260592380227287 I132 -F138 -0.260670830317019 F131 -A137 -0.273831781217474 I132 -S139 -0.28228960298596 A133 -F138 -0.321296249000138 L129 -G136 -0.331295967861784 C128 -F138 -0.341755928777955 L125 -I132 -0.343766850553765 C128 -A133 -0.378589655063248 L125 -L130 -0.418924145775159 A127 -I132 -0.436376895501246