[Fri Aug 26 17:28:11 2016] >Input file: TMQ92M51M1D.pdb >TM segments: 103-125 MAIDEN score = -5.4807 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I119 -G124 0.303024836774028 T115 -R120 0.248305327320137 L114 -M123 0.20304739778923 L107 -T115 0.202189062538576 N106 -L111 0.200467069004006 E108 -T115 0.16689778757153 T115 -G124 0.1601848689994 N113 -M123 0.15311248934858 N118 -S125 0.1400343912516 N106 -T115 0.128587300924278 A110 -N118 0.12369940089121 R120 -S125 0.119990621252864 L114 -S121 0.11120425471233 Q103 -A110 0.110872211307892 L112 -T117 0.108089921614134 N109 -N118 0.0978732580344445 L114 -V122 0.0973245344397853 Q103 -L111 0.0915463943550905 L114 -I119 0.0910189643857122 A105 -L112 0.0866276889472095 E108 -L114 0.0853217896934226 T117 -S125 0.0847483421807821 M116 -S125 0.0792693062513967 E108 -T117 0.0651538593279879 L112 -M123 0.0598530281992673 N106 -N113 0.0494277934229858 V104 -L112 0.0415047884848079 A105 -N113 0.0403161512792196 N109 -L114 0.0320976133539408 N109 -T117 0.0278101652824088 L114 -G124 0.0249598378924416 N113 -R120 0.00875651801524624 A110 -T117 -0.00100850250952789 N113 -S121 -0.0023246840387614 L111 -R120 -0.0057754426830039 N106 -L114 -0.031709512468362 A110 -I119 -0.0344148131786737 L112 -S121 -0.0415370888631479 L107 -M116 -0.043625978397726 N118 -M123 -0.0471140265617582 L107 -N113 -0.0558138739987211 T117 -V122 -0.0629819434604633 L111 -I119 -0.0693696963727959 M116 -M123 -0.0728512875561274 Q103 -N109 -0.0777580421573196 V104 -N113 -0.0955076450032526 V104 -N109 -0.0975066255960768 N109 -T115 -0.099881778461369 Q103 -E108 -0.106781635410436 M116 -S121 -0.10953967898492 L112 -R120 -0.110202281280357 M116 -G124 -0.117115529164095 T117 -G124 -0.125459507849365 N118 -G124 -0.133046920862486 A105 -L114 -0.145349663091938 E108 -M116 -0.147524832398324 E108 -N113 -0.169364945494217 L114 -R120 -0.211646653668679 V104 -L111 -0.212297070561934 T115 -S121 -0.240932825404066 T115 -M123 -0.242280127902818 A105 -L111 -0.247332046616492 L111 -N118 -0.247456757603248 N106 -L112 -0.253112435080246 M116 -V122 -0.254202286313121 L112 -N118 -0.255245612187634 A105 -A110 -0.261765428793717 N109 -M116 -0.263480576372872 T115 -V122 -0.267460670516976 L111 -T117 -0.270010549566372 T117 -M123 -0.277065201816837 A110 -M116 -0.277914499135065 N113 -I119 -0.288556471280327 I119 -S125 -0.332515076870493 L107 -L112 -0.335638991920019 N113 -N118 -0.341213554017737 L112 -I119 -0.344761110155676 V104 -A110 -0.370501835794551 A110 -T115 -0.374996448488957 L111 -M116 -0.387342394994694 L107 -L114 -0.462674384334825