[Mon Aug 29 17:25:47 2016] >Input file: TMQ92MF6M1G.pdb >TM segments: 97-111_ 117-137_ 141-154 MAIDEN score = -8.2851 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- G123 -A153 3.12682373505976 L110 -R117 1.71410812260907 L99 -I104 1.23341732835153 A136 -D144 0.883888994713037 L128 -L148 0.773491709028328 G123 -F154 0.618442144945592 V135 -A141 0.613807853844303 G107 -R117 0.578410508044931 L110 -W118 0.511225296336676 V106 -H120 0.445077631528839 V106 -V121 0.415292466653431 T131 -L148 0.409715992599256 S108 -H120 0.3967070846264 A126 -A152 0.3771932251207 A122 -A153 0.365718228205004 Y98 -G107 0.340301659942821 A136 -A147 0.337453443019041 A124 -L148 0.336094640535516 H119 -A153 0.335959376034149 L111 -R117 0.327346254943843 T131 -D144 0.324347228191904 Y146 -G151 0.308111243746739 G130 -A147 0.306055389169506 A126 -A145 0.296215248591836 G107 -H119 0.296213608477976 Y98 -V105 0.288046989758914 L125 -A153 0.286538943567778 V129 -V135 0.284547690587671 P101 -Y150 0.277575479935818 A122 -G151 0.263551959390335 A136 -A145 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