[Mon Aug 29 17:26:26 2016] >Input file: TMQ92MU3M1G.pdb >TM segments: 179-193 MAIDEN score = -2.2192 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- D187 -F192 0.466990500204998 R184 -L189 0.325173156632289 R184 -D191 0.305180661858253 L183 -H190 0.217638781284038 L182 -D187 0.201775958094565 L182 -V188 0.198696592642698 S185 -Y193 0.187056468718286 M181 -D191 0.141001691759705 V179 -V188 0.12359131814134 L182 -F192 0.0824651990460565 K180 -V188 0.0625781366646065 V186 -Y193 0.0441871750288083 R184 -F192 0.0416654276391415 M181 -H190 0.0194859609778235 L183 -D191 0.0123008164651992 L182 -H190 0.0105476983755809 R184 -Y193 0.00118535209649973 R184 -H190 -0.00677991329203831 V179 -D187 -0.0124720636185751 S185 -F192 -0.0666228264462563 V179 -R184 -0.0667413722931944 V179 -V186 -0.073130369657612 D187 -Y193 -0.0763709703965656 S185 -D191 -0.0779666103800005 K180 -S185 -0.0940006112409675 L183 -F192 -0.104580948849406 M181 -D187 -0.123114800291538 V186 -D191 -0.12522728470005 L182 -D191 -0.126065378046255 K180 -D187 -0.129455884234048 M181 -L189 -0.13048399771105 K180 -L189 -0.171865242422194 K180 -V186 -0.178108953303815 L182 -L189 -0.187701828180821 V188 -Y193 -0.260899693956272 M181 -V188 -0.297427166479188 M181 -V186 -0.35433295536922 V179 -S185 -0.354650336292148 V186 -F192 -0.359482246765572 S185 -H190 -0.367414500911731 L183 -V188 -0.453998812173366 L183 -L189 -0.461851393346823