[Fri Aug 26 17:31:29 2016] >Input file: TMQ92MV5M1D.pdb >TM segments: 176-189 MAIDEN score = -0.5667 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- M177 -S183 0.108311415752928 I178 -S183 0.0562856495782342 A184 -L189 0.0464846404936701 I176 -T181 -0.0104211705213997 I176 -S183 -0.0886114768561809 W179 -A184 -0.124325665105272 M177 -A182 -0.21768438196215 I176 -A182 -0.336726343416679