[Mon Aug 29 17:29:46 2016] >Input file: TMQ92NS9M1G.pdb >TM segments: 153-186 MAIDEN score = -4.3480 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- Y164 -F169 1.00276361867756 F161 -R166 0.501109731508648 Q163 -V168 0.498939826719102 A160 -L165 0.385109742540079 A154 -A160 0.314261115725046 M162 -V167 0.218579485809511 T173 -H179 0.167024748799215 L158 -Q163 0.157843463544625 Y164 -S172 0.152442632116675 V167 -S172 0.146875869989348 L165 -S172 0.115232747712747 R166 -A174 0.110645483003667 V177 -V182 0.107843557289147 F161 -A171 0.0991139280401407 M162 -A171 0.0822202733258436 R166 -T173 0.0777203891960622 A174 -L180 0.0749815232892233 S172 -H179 0.0720312799856747 R166 -S172 0.0711856470159181 S172 -S178 0.0665240564601635 L158 -V167 0.0659021613816151 Q163 -F169 0.0605805429930983 D155 -F161 0.0581794071566915 R157 -L165 0.0572185367733899 Q163 -A171 0.0520130421550423 V168 -V177 0.0458930596713616 V167 -I176 0.0443904411814131 A156 -L165 0.0433681062659823 A154 -F161 0.0415349930810933 F161 -F169 0.0401079490637466 H179 -V185 0.0392143384593684 H179 -G184 0.0389492864612575 V170 -S178 0.0389181247737334 V168 -I176 0.0363184501767932 R157 -Y164 0.0336108475378998 T175 -L180 0.0320023802206002 F161 -V170 0.0314900466709218 F169 -V177 0.0304124713462528 A156 -Y164 0.0288224098417791 A154 -M162 0.0237380368865086 Q163 -S172 0.022809886853203 L158 -V168 0.0216868492613271 A174 -H179 0.0203887367109155 L165 -T173 0.0126441535253714 D155 -Q163 0.0124821811130862 A160 -V170 0.0107629775082483 V167 -T175 0.0100043452048801 A160 -V168 0.00906357139836578 G153 -V159 0.00881329092530336 V159 -L165 -0.00149707287513223 R166 -T175 -0.00277490922799783 Y164 -T173 -0.00385461228996542 G153 -L158 -0.00708178614177291 A156 -R166 -0.00900600506558291 L180 -E186 -0.0122206294370175 R166 -A171 -0.0140747679661983 F169 -A174 -0.0153525114019493 M162 -S172 -0.015811147596084 V168 -S178 -0.0306571906353126 D155 -A160 -0.0339020391997735 T173 -S178 -0.0368482393558183 S172 -V177 -0.0400823566479032 R157 -M162 -0.0429673756026983 V168 -T173 -0.0457590863175001 V159 -V168 -0.0471977251846525 Y164 -A174 -0.0573340062578174 R157 -R166 -0.0581841683982618 A160 -F169 -0.0597249523946788 A154 -Q163 -0.0637904268177376 V170 -T175 -0.0665496225173285 F169 -I176 -0.0685471251472891 A160 -R166 -0.0741299845497116 S178 -S183 -0.0795120524587583 M162 -F169 -0.0804929708745927 V159 -F169 -0.118169848628662 F161 -V167 -0.12336207331372 L158 -Y164 -0.131196779102562 L165 -A174 -0.132360397231517 L158 -R166 -0.134606712103134 R157 -Q163 -0.135261021074207 A154 -V159 -0.141575369279211 A171 -H179 -0.141772736009614 W181 -E186 -0.148544760105368 M162 -V170 -0.149010925397816 D155 -M162 -0.170999316652162 V159 -R166 -0.172025334749798 V168 -T175 -0.177573960802238 V168 -A174 -0.178552440061626 Y164 -A171 -0.182053968563687 V167 -T173 -0.187464464524959 L158 -L165 -0.187849727080062 A171 -S178 -0.193103272951401 F169 -T175 -0.19774971354271 V170 -I176 -0.200601923015197 V170 -V177 -0.216699052842605 A156 -Q163 -0.2202992148248 V167 -A174 -0.233181046219552 Q163 -V170 -0.234511847598844 L180 -V185 -0.257400310723469 V159 -Y164 -0.26094151925953 F161 -V168 -0.268511212111494 L165 -A171 -0.284752014871202 A171 -V177 -0.284963003544216 R157 -V167 -0.289435308478828 Y164 -V170 -0.313481900107579 M162 -V168 -0.318994335251031 V159 -V167 -0.320446916132497 A160 -V167 -0.368686413701485 A156 -M162 -0.392302244413562 A171 -I176 -0.42056375151326 A156 -F161 -0.433675567379689 L165 -V170 -0.45177744316818