[Fri Aug 26 17:36:32 2016] >Input file: TMQ92P89M1D.pdb >TM segments: 34-59 MAIDEN score = -6.1180 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- E52 -P58 0.471222195870731 L38 -V43 0.375647902293383 I48 -Y53 0.338471144803144 W46 -F51 0.269603353467771 P37 -S45 0.240782352860614 G47 -L55 0.179086705264796 A49 -W54 0.166297490629075 A44 -E52 0.16158635057775 V41 -W46 0.158087150087228 S45 -Y53 0.134512096644121 L38 -W46 0.111947486131251 A49 -V57 0.10880914765538 W46 -Y53 0.104432062787522 Y53 -A59 0.101296477403152 L38 -I48 0.0932878951008331 F50 -P58 0.0630144861328853 I42 -F51 0.0570602275748948 P37 -A44 0.0548728439665025 Y39 -W46 0.0491480853307107 S36 -V43 0.0384153663804065 L38 -G47 0.0291506538401278 G47 -W54 0.0255481443194032 F51 -P58 0.0132826279445852 G47 -A56 0.0119588079416038 T34 -I42 0.00627251021681108 F50 -V57 0.00317702866891967 W46 -L55 -0.00229090890776362 Y39 -I48 -0.0138236952084902 I48 -A56 -0.0151228971720161 S45 -F51 -0.0178394227427763 V41 -A49 -0.0209218519243279 T34 -I40 -0.0313396792791716 S35 -I42 -0.0325102935693309 E52 -A59 -0.033609729201203 T34 -Y39 -0.0404539464222966 E52 -V57 -0.0438959166969664 S36 -A44 -0.050110491902279 A44 -Y53 -0.0511189657352284 V43 -Y53 -0.0520137485071404 V43 -F50 -0.0526119830006682 A49 -P58 -0.0551593425560233 Y39 -A49 -0.0614552576658438 S35 -V43 -0.0620845607713432 T34 -V41 -0.0626319669423587 Y39 -G47 -0.0652800107054827 S45 -E52 -0.0658047145795866 Y39 -S45 -0.0668234854819381 I48 -V57 -0.0675184774771154 V43 -F51 -0.070245173070421 S36 -V41 -0.0741894153960931 W46 -E52 -0.0771377540030636 P37 -I42 -0.0813328189863523 I40 -A49 -0.0872413379928458 I48 -L55 -0.0882032912372226 A44 -F50 -0.0926365158077154 F51 -A56 -0.093214849209188 F51 -V57 -0.100577540959468 I42 -F50 -0.10281474267852 P37 -W46 -0.114703216027145 S45 -W54 -0.116242288429691 V41 -F50 -0.118349701233289 V41 -I48 -0.123790139705386 V41 -G47 -0.126185739812379 W54 -A59 -0.137463958763269 F50 -A56 -0.147347756993595 S35 -I40 -0.150734541935623 L38 -A44 -0.161906855385178 S36 -I42 -0.164406900599553 I42 -G47 -0.167698695938808 A44 -F51 -0.168400539245031 P37 -V43 -0.16942009724674 V43 -E52 -0.183050029270465 A49 -A56 -0.188778978563382 G47 -Y53 -0.19300314509587 Y53 -P58 -0.193567306291968 I40 -S45 -0.203975647154749 W46 -W54 -0.20687551610735 A44 -A49 -0.218689451011452 V43 -A49 -0.231972860832037 I40 -I48 -0.247779383990983 G47 -E52 -0.259200314880206 I42 -I48 -0.259657046774038 A49 -L55 -0.260354430769412 V43 -I48 -0.262426401044653 L38 -S45 -0.262658347034479 S45 -F50 -0.28683297423332 I40 -G47 -0.292619493144898 I40 -W46 -0.2936917257781 Y39 -A44 -0.330023295197338 I42 -A49 -0.331289300574763 I48 -W54 -0.343737288595462 S35 -V41 -0.364438982942849 F50 -L55 -0.371693906712815