[Fri Aug 26 16:27:08 2016] >Input file: TMQ9BTV4M1D.pdb >TM segments: 106-132 MAIDEN score = 8.6281 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- R117 -Q123 3.54231646077341 L115 -E126 1.37907025248167 V119 -W124 1.19344402320212 V113 -E128 1.06446212398607 L115 -Q123 0.879551070803437 V113 -T127 0.763086978213753 K114 -V125 0.501013648783072 A112 -T127 0.483635072337536 R117 -V125 0.470977276670995 L115 -V125 0.461138233685381 P111 -E126 0.441199293573525 L115 -T127 0.345899209252734 A112 -S130 0.324458906435354 V113 -E129 0.322489312020354 L115 -E128 0.309792697801945 V119 -V125 0.300176631412303 A112 -E129 0.272709461446512 H109 -K114 0.269411528937377 H118 -W124 0.255468239328146 P111 -R131 0.178024014011998 K114 -S130 0.17219199338744 P111 -R116 0.160015806215375 V108 -V113 0.14228808967531 R116 -E126 0.134600285042098 A112 -V125 0.119433172676275 R116 -Y122 0.114435102777703 K114 -Q123 0.102303812495579 V113 -E126 0.100363025296833 L110 -E129 0.0894601950984102 L115 -M121 0.0888594802191625 Y122 -T127 0.0882204643962206 K114 -E129 0.0860047746924417 L110 -R131 0.0821958788810178 G107 -A112 0.0812882628298124 H109 -E129 0.0790391832163029 V113 -Q123 0.0745438536718603 R117 -E126 0.0712980416710307 E120 -E126 0.0687234045493434 H109 -S130 0.0655674619232192 L115 -Y122 0.0622262488734195 L110 -S130 0.0487262945457596 R117 -T127 0.0487154683117716 H109 -E132 0.0481468016912679 H109 -E128 0.0461188580238622 L110 -L115 0.0457413383717693 H118 -Q123 0.0366673571424618 P111 -T127 0.0335961520386019 K114 -V119 0.0325679276367643 L115 -E120 0.0233760805835406 A112 -R131 0.0190070890016867 V113 -S130 0.0167194412758827 Q123 -E128 0.00303322349512891 H118 -V125 -0.00485945982216496 V119 -T127 -0.00568134999081504 R116 -E128 -0.00978717098761067 V113 -R131 -0.0166219657679649 R116 -E129 -0.0226279167982106 H118 -E126 -0.0388552460918909 L110 -E128 -0.0410606888956266 L110 -R116 -0.0504361719201173 H118 -T127 -0.0604778335576288 R116 -T127 -0.063293055712637 K114 -Y122 -0.0667406665978918 L115 -E129 -0.067144646056327 A112 -E132 -0.0722669181712292 P111 -V125 -0.0733807767232872 K114 -T127 -0.0755404092242493 K114 -E128 -0.0960945822097177 V113 -W124 -0.0978450758165972 A112 -E128 -0.0982132132719054 R117 -E128 -0.1036807587634 L115 -W124 -0.108456088547314 Y106 -P111 -0.119153286535374 L110 -T127 -0.11965673328181 L110 -E132 -0.123172542292436 A112 -E126 -0.143210467376108 V113 -E132 -0.143600298342589 P111 -E128 -0.143946237385742 L110 -E126 -0.160338695402474 K114 -R131 -0.161046078655448 M121 -E126 -0.190409486850049 H109 -R131 -0.213766183086006 V119 -E126 -0.232724242904637 R116 -M121 -0.247321878380526 K114 -E126 -0.252916892248608 V113 -V125 -0.271532881075995 P111 -E129 -0.272797687256691 K114 -W124 -0.27439725210396 P111 -S130 -0.290216864191147 R116 -W124 -0.326644065916059 E120 -V125 -0.341743085631458 R117 -W124 -0.373559172057494 P111 -E132 -0.381497885335772 R116 -Q123 -0.456518997128585 R116 -V125 -0.461180458672917 R117 -Y122 -0.641257095086007