[Wed Nov 23 04:01:16 2016] >Input file: TMQ9BZW2E3D.pdb >TM segments: 391-407_ 413-420_ 518-547 MAIDEN score = -3.5248 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L404 -I413 1.59829791220993 T520 -F525 0.811395294508984 L391 -L521 0.66909137099604 T405 -V414 0.617530438221973 T403 -V414 0.605916541578776 P535 -F540 0.568361105155227 L521 -A526 0.557362991679681 L404 -V414 0.524750856394174 L391 -F525 0.416092162986393 N536 -H544 0.392373812709964 T403 -A415 0.373034443275368 K406 -A415 0.355241487709567 P400 -T407 0.291907484744402 A537 -K546 0.291398922851015 I538 -H544 0.282435336531718 K402 -T407 0.263938304822651 A537 -G543 0.238648365334269 F396 -A401 0.224071417353595 T520 -L528 0.220914464508509 V531 -N536 0.216388962334521 S519 -S524 0.214214545579233 I538 -L545 0.205648019722654 L529 -P535 0.201706416041854 K406 -I413 0.199557314577689 L529 -P534 0.199224760784029 P400 -S419 0.198555191032752 K402 -Y418 0.197314585660449 P534 -H544 0.196716045773949 K402 -I413 0.192359773523588 P530 -S541 0.191838314129794 K406 -S541 0.187484515920656 A401 -D417 0.186478622851956 S541 -V547 0.180726096345557 L528 -N533 0.174950498960773 G393 -A526 0.167409579691445 L395 -P530 0.164797017881245 N533 -I538 0.162620862365078 T405 -I413 0.16221317922092 I392 -T523 0.156207430649498 I538 -G543 0.155510680004692 V539 -L545 0.146887299825325 N536 -S541 0.143360590845364 T405 -D417 0.132601925339978 A537 -Y542 0.130626107723059 G393 -L398 0.129702517699751 P400 -V414 0.121795426388158 L391 -L398 0.1203263125749 L521 -L529 0.114529335102011 L394 -L528 0.112755345267353 L529 -N536 0.107429064560066 V414 -S419 0.106592130253522 P535 -L545 0.105237118400065 C522 -F527 0.100728872660713 P534 -F540 0.0996399342703218 L391 -T523 0.0982107364848073 N536 -G543 0.0938240672536388 L395 -L529 0.0925768434153416 A532 -V547 0.0916251324648574 A537 -L545 0.0890732059398029 F525 -V531 0.0883472103479672 F527 -A532 0.0880548126392107 I392 -C522 0.0844608250363582 T403 -S419 0.0818454067295277 I392 -A526 0.0789943041069847 L398 -F416 0.0779496105166118 L404 -D417 0.0754344987958939 S524 -P530 0.0742000818558921 A526 -A532 0.0732470428849319 K402 -S419 0.0724171314864317 S524 -V531 0.0721823537274613 I399 -I413 0.070750031817945 S419 -S541 0.0670160404565783 S524 -L529 0.0643284504768964 L395 -P420 0.0638574198827149 P518 -F527 0.0637227718710445 F397 -P420 0.0632748163821011 C522 -V531 0.060961463514718 T405 -Y418 0.0609133409660281 F527 -N533 0.0597409820846204 L391 -L529 0.0589349829825405 F397 -K402 0.0585271235447926 T405 -S419 0.0584416120661069 I392 -L528 0.0576622747873694 I392 -P518 0.0563893050083255 L394 -P400 0.0559431816189999 L391 -S524 0.0556763515198924 L391 -S519 0.0556182380154375 P535 -G543 0.0555768534420564 L395 -F527 0.0540300481187215 G393 -L521 0.0537990201530011 A401 -Y418 0.053746768454809 P534 -V539 0.0516061689884366 F396 -T407 0.0511612303721698 P534 -V547 0.0479718543883578 L394 -C522 0.0470036040754263 N533 -F540 0.0465812852450238 I399 -P420 0.0451678346791122 T403 -I413 0.0448010367572529 L394 -L529 0.0434777902183114 L398 -T405 0.0386510602645256 I399 -S419 0.0381521771639433 N536 -Y542 0.0373815170163909 P530 -I538 0.0372656154815982 T405 -Y542 0.0336051221562226 L395 -A526 0.033171577662674 V539 -K546 0.0307959356561992 P518 -L528 0.02949799783981 T405 -F540 0.02872943671965 S541 -K546 0.0265609236475303 A532 -V539 0.0259247688336148 F397 -T403 0.025510358986332 L395 -L521 0.0235300561227412 I399 -V414 0.0220129554395296 G393 -L528 0.0201638784849338 L395 -L528 0.0198572835445372 A401 -I413 0.0187313223753982 P518 -T523 0.0160652193525168 L394 -A401 0.0137118162894847 K406 -P534 0.0130606529092536 N536 -V547 0.01217746229826 A401 -A415 0.0118006600251864 L398 -Y418 0.0115935311282733 F396 -Y418 0.0111321592552232 I392 -S524 0.0107721350250083 A401 -V414 0.00939600328530332 I399 -F416 0.00469412868070851 V531 -F540 0.00286828600885869 P530 -A537 0.00187963076814812 F396 -P420 -0.000675268352326786 P534 -L545 -0.00104263074362265 T523 -V531 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-0.0338797916802029 N533 -S541 -0.0346539997861351 P400 -P420 -0.0351596284221394 T407 -V414 -0.0352736782038683 F397 -Y418 -0.0365340908684009 F396 -F525 -0.0368929269891884 F525 -A532 -0.0372128727761147 L391 -P530 -0.0372795865308326 A526 -N533 -0.0390166364233782 T407 -P530 -0.0392427428226059 P535 -H544 -0.0400438946205791 G393 -F525 -0.0401676940865592 S519 -F527 -0.0431827074596456 L394 -K406 -0.046262616670098 A532 -I538 -0.0462827425799226 K406 -F416 -0.0493748321627852 A532 -S541 -0.0589765122579999 S519 -L528 -0.0596046929151115 F396 -S419 -0.0601625139238466 A537 -V547 -0.0627207580660603 L394 -T520 -0.062916914136478 I392 -S519 -0.0654057957680099 A415 -P420 -0.0657476854502221 K402 -P420 -0.0671782534215852 G393 -P518 -0.0678661368046305 L391 -C522 -0.0686218473052818 N533 -V539 -0.070184942932215 L394 -T523 -0.0706743546599893 I392 -T520 -0.0709276198727053 L398 -P420 -0.0724236988542515 I392 -L529 -0.0738948350054081 L528 -P534 -0.0742271731647257 G393 -K402 -0.0747210435945957 I392 -L398 -0.0748945949121014 P530 -V539 -0.0765615824838963 L391 -F527 -0.0785746993077705 T405 -A415 -0.0849437837413995 Y542 -V547 -0.0860012123762481 P535 -S541 -0.0864274985461222 L395 -C522 -0.0877631867431353 T403 -D417 -0.0880775354806795 P535 -V547 -0.0922413993643012 L394 -S524 -0.0928808841545221 K406 -N533 -0.093757444099463 P400 -I413 -0.0952939625728968 L391 -F397 -0.0962968523925012 F525 -P530 -0.0977727507493298 A401 -T407 -0.101878595834255 L395 -K406 -0.101932313285918 A532 -F540 -0.103324070046409 P518 -F525 -0.10362176053841 P535 -K546 -0.106469218718705 I413 -Y418 -0.110443858728383 V531 -I538 -0.111583668979609 L395 -P400 -0.112346718117503 P534 -Y542 -0.120423502629657 F397 -T407 -0.12372534608834 L394 -F527 -0.126018102313043 N536 -K546 -0.133476658045736 P530 -F540 -0.133694287939512 L404 -Y418 -0.135929113233098 F397 -D417 -0.137147284854899 L398 -D417 -0.138027853388367 P518 -A526 -0.141018733779903 K406 -P530 -0.145072946654909 P534 -K546 -0.146283606554064 L391 -P518 -0.152766789552665 I538 -V547 -0.154397967020691 I538 -K546 -0.1545512139235 P530 -N536 -0.155408158318457 T520 -A526 -0.156818506100196 L394 -P518 -0.157028576432489 L395 -A401 -0.157353733696669 K402 -D417 -0.157397177843502 I392 -I399 -0.16057462695164 P400 -K406 -0.16069134318443 L394 -L521 -0.165682639142156 I399 -K406 -0.170098445276889 L404 -F416 -0.170209978887719 I399 -L404 -0.171419335100959 L394 -F525 -0.173436561168129 L391 -A526 -0.178583548057534 P535 -Y542 -0.179098369512021 I399 -Y418 -0.184922086577391 I399 -T407 -0.187742255567842 P400 -T405 -0.187800916695564 K402 -F416 -0.189237039305168 P530 -P535 -0.190865290313917 L391 -L528 -0.190883258344023 L395 -S524 -0.191594738883694 P400 -Y418 -0.19315806971407 F540 -K546 -0.195224935835862 K402 -V414 -0.196069067601957 L528 -N536 -0.197529149658435 T523 -P530 -0.198041303035971 F540 -V547 -0.198180447504964 T407 -I413 -0.223234158036154 L398 -T407 -0.223331734939898 A537 -H544 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C522 -L529 -0.530241989004286