[Mon Aug 29 16:44:34 2016] >Input file: TMQ9C9E4M1G.pdb >TM segments: 502-548 MAIDEN score = -4.0660 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- Q515 -D526 0.692284466202718 F502 -T530 0.539707096524555 Q505 -P510 0.479361992412518 N509 -Q515 0.379379249052442 Q515 -K521 0.358124029260985 S514 -A525 0.356480626679056 Q513 -E524 0.33766155092862 Q515 -A525 0.336010702227001 F502 -E524 0.333836189511832 K506 -S532 0.329560008456208 G529 -S535 0.319155409272034 F538 -E546 0.318893494480847 K506 -S516 0.311053254876208 V518 -P523 0.304344391768002 F502 -D528 0.301334961242325 L504 -T530 0.2393201029686 G503 -N509 0.235669830387431 V518 -E524 0.234115552110226 Q505 -D528 0.230509882249988 D528 -K534 0.224904653059231 A512 -S532 0.218517340678773 K506 -D526 0.218400858115148 S514 -S535 0.21314641504233 L517 -S522 0.201957079767467 N509 -R527 0.199713477218894 Q515 -F520 0.193133238442088 G529 -D536 0.192647243216344 P510 -D528 0.176440868912328 Q515 -G529 0.174693609709834 P510 -R527 0.17389927264699 G503 -D528 0.170521008002929 R527 -S539 0.163768423363938 P523 -D528 0.160821261536397 K506 -E524 0.158313597460848 L507 -S516 0.157745934385235 P510 -G529 0.153069731421961 Q505 -S516 0.152743559558501 R527 -S535 0.151015545520579 K534 -G541 0.150216788911407 Q515 -P523 0.150034206181139 G503 -G529 0.148675603046427 F502 -V531 0.145280652956981 A512 -D528 0.138301513224614 F502 -L507 0.135833632106408 F502 -S532 0.12845668854444 Q515 -T530 0.126693589359843 Q513 -V531 0.125002330844338 G529 -F540 0.123312802181773 V531 -V537 0.122651408952003 N509 -S514 0.118912020988529 S514 -A533 0.11838457265826 A512 -A525 0.118217802065995 Q505 -S532 0.116601646014764 G529 -V543 0.112337529466273 K506 -G529 0.111753158569478 A533 -V542 0.107293126080863 R527 -A533 0.10641473263009 F502 -Q515 0.101288631080696 L517 -P523 0.0998300158859369 D528 -S539 0.0967898602428987 G503 -R527 0.0959181413352657 A512 -G529 0.0958592084887986 K534 -V542 0.0939311636535569 K521 -D526 0.0926318001702556 S514 -V531 0.0923806929474686 S535 -V543 0.0917898451620873 G529 -V537 0.0909870154709296 K506 -D511 0.0897744367262965 S516 -R527 0.0886646883486379 L517 -E524 0.088171012587172 P510 -A525 0.0876529319306236 T530 -S539 0.0861911554347308 Q513 -R527 0.0859630327356006 L504 -R527 0.0848804666664914 L507 -S514 0.0824047745349872 Q515 -R527 0.0820648862432253 S539 -V544 0.0800180602394969 N509 -A525 0.0797563375801356 L504 -Q513 0.0765414416570227 G503 -P510 0.0764579510451298 L507 -V531 0.0764554213791702 D528 -F538 0.0754999622309505 G503 -A525 0.0719465483809998 N509 -T530 0.0707925473117905 Q513 -V518 0.0706741593156231 L504 -A512 0.0656394545387855 F502 -A533 0.0637467705800741 A512 -P523 0.0626130966488301 I508 -S516 0.0624927696782582 F502 -A512 0.062341847164759 Q505 -P523 0.0622565658403529 F520 -A525 0.0610374978305406 L517 -D526 0.0602273959308244 S532 -S539 0.060155390984133 F502 -I508 0.0576138854110715 N509 -P523 0.0572714769954841 A512 -L517 0.0569506383947165 A525 -V531 0.0568885138905024 L517 -A525 0.054543003246952 G529 -G541 0.054540153249981 K506 -Q515 0.0535513496189095 V518 -D526 0.0528880839970869 A519 -A525 0.052118197762713 G529 -V542 0.0516677053532426 L504 -Q515 0.0507407763797874 D511 -S516 0.0491702001095582 T530 -F538 0.0479368810760477 I508 -S514 0.0468570208500378 I508 -A525 0.0467804004527497 S516 -D528 0.0467189099485932 D511 -S532 0.0456835234483781 K506 -A525 0.0443313422199747 L507 -A525 0.0436373186117223 P510 -S532 0.0416094913136291 V531 -S539 0.041147432776766 N509 -E524 0.0405102339194698 F502 -N509 0.0404652273600422 G503 -A533 0.0402422456844365 G503 -S514 0.0398952221704622 D528 -F540 0.0397190645088612 Q513 -A525 0.0391718007992301 L504 -P510 0.0379295932955692 L504 -A525 0.0344059464946205 L504 -S514 0.0335646122545343 N509 -S516 0.033522851002191 A533 -F540 0.0322616862667804 I508 -V518 0.0299799398925904 L507 -D528 0.0297759501727688 F502 -Q513 0.0292297917699109 S514 -S532 0.026256096852701 L517 -R527 0.0256369866976645 Q515 -V531 0.0243221450881554 L504 -G529 0.0242080321778868 S532 -G541 0.0239543732307235 N509 -D528 0.0237150238234908 D528 -S535 0.0233063871024144 Q513 -S535 0.0201846797111718 S516 -K521 0.0170932886008819 F502 -P510 0.0163613050650289 S532 -F540 0.0145188428517383 S516 -D526 0.0132523194984717 F538 -L545 0.0125494296544897 D528 -A533 0.0124470209163965 R527 -S532 0.0124393003485292 D526 -S532 0.0103118779401036 T530 -V537 0.00982712723240908 D526 -S539 0.00879322178700795 N509 -V531 0.00744364454354463 S514 -S522 0.00638195740269776 V531 -F538 0.00607680296385193 Q513 -P523 0.00305580863307675 L507 -G529 0.00273443161184206 A533 -G541 0.00144261465518358 Q505 -V531 0.000961172396093168 S532 -F538 -0.000684363721473957 A512 -V531 -0.00315983705935041 S539 -E546 -0.00439850028140487 R527 -D536 -0.00497936620653583 F538 -V544 -0.00556541608584915 A533 -F538 -0.00605139228249896 G503 -Q513 -0.0061390425555965 F540 -L548 -0.00685204065842893 L504 -D511 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-0.0610029677102322 K506 -S514 -0.0634620428993613 F538 -I547 -0.0643601198436579 S532 -V542 -0.065450790447366 Q505 -T530 -0.0661305178393203 S522 -R527 -0.0674084911262478 Q513 -D526 -0.0695928959027474 Q513 -S532 -0.0708715592631943 S535 -V544 -0.0713419827789616 S516 -P523 -0.0714442669189621 K506 -T530 -0.0717297881211953 Q515 -D528 -0.0731700278698497 A512 -D526 -0.0740434040687687 Q515 -S522 -0.0768685933959585 A525 -T530 -0.0786961352439095 E524 -G529 -0.0790799634857247 G503 -E524 -0.0793553894995533 T530 -D536 -0.0799836770416711 I508 -D526 -0.0800318198212218 L504 -D526 -0.0851816019937961 Q505 -E524 -0.0862720018805618 L504 -V531 -0.0876588774715605 A512 -E524 -0.0960400023449038 P510 -T530 -0.0973979299781966 F502 -D526 -0.0983320218867914 G503 -T530 -0.100121390970021 D536 -L545 -0.101283644914336 A512 -R527 -0.102603702460483 F502 -A525 -0.103566142982838 P510 -L517 -0.104007806971894 A533 -S539 -0.105166644349452 Q505 -S514 -0.106654073219525 L507 -T530 -0.110481748021787 D536 -V544 -0.110612340265674 R527 -F538 -0.111823300026312 N509 -D526 -0.111976805754577 D526 -V531 -0.112005848223685 K506 -R527 -0.112246839904241 I508 -G529 -0.112969598889096 S535 -G541 -0.113727542758287 K506 -V531 -0.114120646493382 K534 -V543 -0.114887832846214 K506 -A512 -0.115038524187453 F540 -I547 -0.116629216141082 Q513 -D528 -0.118048022038583 D511 -R527 -0.118198689139446 S516 -S522 -0.120997020474435 R527 -V543 -0.122776989028962 F502 -G529 -0.127121198664972 G503 -I508 -0.128977484288484 N509 -L517 -0.135504938525848 S516 -E524 -0.135678767353937 F502 -D511 -0.13570466678434 K506 -A533 -0.136278868659853 G529 -F538 -0.140146166311857 Q505 -A512 -0.140287228132561 S514 -E524 -0.142116073494427 L507 -R527 -0.144793748435431 Q505 -R527 -0.14679114236873 D511 -V531 -0.150120740622921 I508 -L517 -0.15118504507091 A512 -T530 -0.153682757807222 V537 -V543 -0.153965295247689 F540 -E546 -0.155002533809022 K534 -S539 -0.15640737543292 F502 -R527 -0.156422801537543 R527 -K534 -0.156544075970783 V537 -E546 -0.156911237472989 G503 -V531 -0.160321246460775 I508 -D528 -0.162161038610839 L507 -Q515 -0.163075153132708 K506 -D528 -0.163874960214997 L507 -A512 -0.164008298429351 D511 -L517 -0.166689303761244 D528 -D536 -0.167914778219736 G529 -K534 -0.174187701828852 I508 -E524 -0.175467536756081 S514 -P523 -0.176710594618209 F538 -V543 -0.176891269333119 S539 -L548 -0.182537709578847 N509 -G529 -0.182921219684551 S514 -D528 -0.183553957206535 D536 -V542 -0.185818671892457 P510 -V531 -0.187659300713081 D528 -V537 -0.189561951082694 G541 -I547 -0.19185220296581 S514 -D526 -0.191886895065648 F502 -S514 -0.192049494780834 Q505 -Q515 -0.19248990351397 S516 -A525 -0.193149728627926 L504 -D528 -0.194003461408246 K534 -F540 -0.194791466589705 D528 -V542 -0.20453056051362 V537 -L545 -0.210313145227304 K506 -Q513 -0.216585250608002 G529 -S539 -0.217128748480252 Q513 -G529 -0.219196721373215 D536 -E546 -0.220465436212888 G541 -E546 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