[Mon Aug 29 16:46:40 2016] >Input file: TMQ9CEG6M1G.pdb >TM segments: 41-53_ 55-67_ 95-112 MAIDEN score = 4.0638 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- E98 -R104 10 S50 -I55 1.12442134510859 N51 -T56 0.925969343625455 L62 -L67 0.754681476793169 S96 -I102 0.736911810380017 S97 -R104 0.625675807222231 M100 -A105 0.59896912118518 E98 -A103 0.557210144876873 S50 -G58 0.516181777263351 W48 -G59 0.507415443166757 S96 -R104 0.497008201286253 S44 -L67 0.475198749028474 M99 -A105 0.47059652897364 S97 -A103 0.468364240250283 T95 -I101 0.45344869669626 S44 -L62 0.451985249124999 E98 -A105 0.427920794643287 S47 -L63 0.423545650192617 S47 -F60 0.406471467218839 S96 -I101 0.371664915315661 L61 -R66 0.333991575680553 V49 -G59 0.325869725524276 T45 -T56 0.302482816740307 E43 -G58 0.288730421049205 M41 -L67 0.283266477334591 S44 -G65 0.281121233731316 L46 -L62 0.264735261044708 L46 -G59 0.260944201315696 S47 -G65 0.237966934194007 N51 -F57 0.232293469398501 L46 -T56 0.225819319320554 S44 -N51 0.221423232861469 A52 -F57 0.220911804213099 S47 -L67 0.22072771525538 E98 -V106 0.219977904514994 S44 -A52 0.218555638468458 E43 -W48 0.204176969401889 T45 -I55 0.196440861372496 T45 -A64 0.185827160432165 M41 -S50 0.180011212710093 A52 -G58 0.179222162299336 T95 -Q107 0.178902019555128 N42 -G59 0.178840430052973 L46 -G65 0.17774288463797 T45 -F60 0.172770649873092 V49 -F60 0.172129397312415 M99 -Q107 0.170567608228866 M41 -R66 0.164796205767837 W48 -L63 0.158025498642807 T45 -G58 0.153674185113448 T45 -L63 0.152924514119587 M100 -G108 0.142984157574859 N42 -S50 0.142920233576099 R104 -A112 0.142054409627842 F57 -G65 0.140122338185992 S97 -V106 0.137747431929336 F57 -R66 0.133121753313518 W48 -L62 0.130599870630375 N42 -N51 0.130477849459009 G59 -R66 0.120708723424447 S44 -T56 0.118276355090496 W48 -F57 0.11562309162336 N42 -A64 0.115423596212775 A103 -G110 0.107967249781654 V49 -L61 0.103173057056757 Y53 -L62 0.102713626379804 S44 -L63 0.0998133939814263 Y53 -F60 0.0974457665485904 S44 -G58 0.0968938391268805 M41 -G59 0.0932814825098669 E43 -R66 0.0876270733271092 S47 -G58 0.0873983344873488 R104 -I109 0.0873439292496863 M100 -Q107 0.08449251470552 S47 -T56 0.0833440029116521 E98 -G110 0.0819467018377216 M41 -V49 0.0775889290091865 T45 -R66 0.0770293852974868 M41 -A64 0.0733709547749669 S44 -V49 0.0708457399202258 T95 -V106 0.0592014888388559 T45 -F57 0.0558405665614305 S44 -S50 0.0515474608308049 S97 -I102 0.0505835499243652 L46 -N51 0.049369163265057 S50 -G65 0.0480098367626871 S96 -G108 0.0474803144458724 S50 -A64 0.0474471624442261 A52 -F60 0.0462519600056472 V106 -S111 0.0450067928212983 N42 -G58 0.0427411645631635 M41 -L61 0.0420885659332462 E98 -S111 0.0389737090602607 R104 -S111 0.0387593304203886 S97 -G108 0.0379297086874151 T45 -N51 0.0355736925384063 A52 -L62 0.0327569474024798 Y53 -G58 0.0252497400511649 G58 -L67 0.0247100666459201 N42 -L67 0.0233307513585826 E43 -Y53 0.0189362904554713 S47 -F57 0.0171596723607351 S47 -L61 0.0156158428724318 A103 -S111 0.0147876624253525 W48 -G65 0.0144907392351796 L46 -F57 0.0137868480306294 N51 -G59 0.0107968929757973 M99 -S111 0.00927522434602146 M41 -F60 0.00665326402903421 I55 -A64 0.00350921409396676 Q107 -A112 0.00113759174751582 T95 -M100 -0.00263537832714711 I102 -G110 -0.00282224907457684 S44 -F60 -0.00370263777922775 N51 -A64 -0.0056428713049837 V49 -L63 -0.0093684522044466 N42 -W48 -0.0118162793800739 N42 -F60 -0.0126248405700276 T45 -G65 -0.0157093742296941 E43 -S50 -0.0187238605407236 T95 -I102 -0.0228070339607158 N42 -A52 -0.0239992182741364 T56 -R66 -0.0246876309652997 N51 -F60 -0.0257706618240592 M41 -L62 -0.0316784859116792 T56 -L62 -0.0325077174855934 W48 -A64 -0.0350164488994302 M41 -G65 -0.0366640207677271 T56 -L63 -0.0376117035195218 L46 -A52 -0.0404577934604731 V49 -T56 -0.0407412792034636 M99 -I109 -0.0462730939256031 T95 -G108 -0.0485664005964126 T56 -G65 -0.0492106902850766 S44 -F57 -0.0498118078623788 E43 -N51 -0.0502728197004698 S44 -Y53 -0.050456962275764 M100 -I109 -0.0522506341827863 F60 -R66 -0.0522630952025445 R104 -G110 -0.0538944986033929 N51 -L63 -0.0545560053398133 L46 -L61 -0.0570962165071371 I101 -G110 -0.058478139147808 Y53 -L61 -0.0594103244178532 S50 -L67 -0.0596493147370763 S47 -Y53 -0.0598694849961445 S50 -T56 -0.0654321062402774 W48 -L61 -0.0655858985083286 E43 -L62 -0.067770402067195 A103 -A112 -0.0685013703973902 W48 -F60 -0.0703537235678602 S50 -R66 -0.0717467405198239 T45 -Y53 -0.0756717385792194 T95 -R104 -0.0761980124718171 S47 -R66 -0.0763534915316272 T56 -A64 -0.0773060491122783 E43 -V49 -0.078890619933154 I102 -I109 -0.0789106957118317 I102 -S111 -0.0792220932932239 S96 -Q107 -0.0798294317208694 W48 -G58 -0.0804177538144852 S44 -I55 -0.0816732742850579 T45 -L61 -0.0827527660749001 E43 -A52 -0.0832798840981375 I101 -G108 -0.0847410416867937 A52 -L61 -0.0902198859525782 E43 -A64 -0.0911635630729828 S44 -R66 -0.0970080254868801 N42 -S47 -0.099135349746455 T95 -A103 -0.100305461136954 E98 -I109 -0.102140441838315 F57 -L67 -0.10217259689724 V49 -F57 -0.102343439161795 M99 -R104 -0.103272296351071 V49 -L67 -0.103355629083758 T45 -A52 -0.104177125199479 G58 -G65 -0.107051882028522 L46 -A64 -0.107082214015468 I55 -L63 -0.107145461248813 S44 -A64 -0.107949263219881 T95 -A105 -0.108282185505182 L46 -I55 -0.111099100336248 A52 -G59 -0.11313616408095 N51 -L61 -0.114827416109839 G59 -G65 -0.1151318858588 V49 -G58 -0.11817223707338 F57 -L63 -0.118570058506963 N51 -G58 -0.119294081238876 E43 -L61 -0.119682486034679 W48 -I55 -0.120705621728696 S47 -I55 -0.129249825043685 W48 -Y53 -0.131189915774824 W48 -R66 -0.132084218425081 F57 -A64 -0.13212119239461 E43 -L63 -0.134286486879527 G59 -L67 -0.136654506783252 N42 -L61 -0.146280247022569 N42 -R66 -0.14652420587564 I55 -F60 -0.148594879927264 E43 -I55 -0.153106265012836 L46 -Y53 -0.158074187975634 Y53 -G59 -0.159947231042123 S47 -L62 -0.162635978372683 A52 -L63 -0.164729602754015 E43 -G65 -0.165822663265664 I101 -I109 -0.167321387785501 M41 -W48 -0.167696127151796 N42 -L62 -0.168938495482445 G58 -R66 -0.174560989771421 L46 -G58 -0.176136105270832 M99 -G108 -0.177825785999422 L46 -F60 -0.179147047047675 T45 -S50 -0.18100738403133 N42 -G65 -0.18386491367316 S97 -Q107 -0.188648085183897 S50 -L61 -0.191867899821652 M41 -S47 -0.191988596424529 N42 -V49 -0.198516014518367 S44 -L61 -0.200051128541612 A105 -A112 -0.200099203822233 S96 -A105 -0.200659912340353 S97 -A105 -0.202917148430725 L46 -R66 -0.203865627107449 E43 -F57 -0.20452213047049 S47 -A64 -0.205578190641114 W48 -T56 -0.20750456662435 M100 -V106 -0.207899936636225 T45 -G59 -0.211102382340242 F57 -L62 -0.21305095155844 E43 -T56 -0.213367526621917 W48 -L67 -0.218732715725729 S44 -G59 -0.220311571829043 S50 -L63 -0.220904292867887 I101 -Q107 -0.221348126867719 S50 -F60 -0.222394644685839 A105 -S111 -0.227722534023104 F60 -G65 -0.228334368763139 N51 -L62 -0.229731840266613 M99 -V106 -0.237735052418884 T45 -L67 -0.2465973246225 N42 -L63 -0.246833939998538 M41 -L46 -0.254345403606736 I102 -G108 -0.261560381116437 G58 -A64 -0.268022991007777 E43 -G59 -0.272502024089338 F60 -L67 -0.273233304848846 E98 -G108 -0.273646373998886 S50 -F57 -0.274576940932411 V106 -A112 -0.276396300262769 V49 -R66 -0.278337730565424 G58 -L63 -0.280462817550887 V49 -L62 -0.287972743534972 A103 -G108 -0.291811365901349 S96 -V106 -0.294135892257666 E98 -Q107 -0.300292065211881 T56 -L61 -0.300957358765201 T45 -L62 -0.302962618874902 I55 -L62 -0.316311944769775 S50 -L62 -0.323877681846685 L61 -L67 -0.325159976760943 A103 -I109 -0.329086417799821 I55 -L61 -0.336733338820866 I102 -Q107 -0.341533053706125 V49 -I55 -0.3705182669983 S47 -A52 -0.373544745298517 L46 -L63 -0.405239996176295 S96 -A103 -0.425138360921905 E43 -F60 -0.438490118647253 L46 -L67 -0.457414044596338 M41 -L63 -0.459367725081418 G59 -A64 -0.471219079266875 I101 -V106 -0.474648417739906 A105 -G110 -0.475074426466226 E43 -L67 -0.521816839752117 S50 -G59 -0.609354894240686 S47 -G59 -0.695131797768731