[Mon Aug 29 16:50:08 2016] >Input file: TMQ9D0L6M1G.pdb >TM segments: 73-104_ 159-166_ 168-182_ 215-222 MAIDEN score = 76.4366 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- M81 -V90 10 C82 -E218 10 N83 -E218 10 N83 -N217 10 D80 -I220 10 M81 -I220 10 C82 -K219 10 C82 -V90 2.06004967636803 N83 -H179 1.31920638886627 C77 -S92 1.20462983824082 C76 -S94 1.16780802693523 M81 -L91 1.15155905508397 C77 -S94 1.07007151724655 M81 -K219 1.03505873547773 H180 -N217 1.03504286362184 Y84 -E218 0.942914763505065 D89 -L215 0.879442476573546 H78 -L221 0.874489894341083 Y84 -I220 0.696683484192722 C82 -I220 0.676631137351414 H78 -D163 0.635999769766748 H78 -P93 0.629762651906382 D80 -H179 0.606572762284917 H177 -K182 0.60348723640899 C82 -D89 0.563862026058409 S181 -L215 0.525369276904187 G178 -S216 0.505311661454602 C77 -L221 0.485842828092744 L74 -K95 0.484745830134873 E97 -D163 0.48435851112313 C82 -L91 0.481446769000796 C77 -H88 0.460290270334832 P93 -D163 0.456875702614579 C77 -P93 0.456078616411363 D80 -V90 0.439136308967434 C76 -E97 0.416186336785939 C77 -R160 0.414518551681664 N83 -V90 0.404615949855815 H78 -K95 0.403363969583394 E79 -I220 0.396995961795945 H78 -S96 0.390933949912869 R85 -L215 0.389383137322914 C77 -K219 0.387847612376844 C82 -K182 0.386238631463091 C82 -H179 0.383730097085095 E79 -S92 0.377627946418457 K95 -Q162 0.375701100684175 Y84 -K219 0.366619273820871 C76 -R160 0.345112431860262 D80 -H173 0.344644757592798 E75 -G100 0.343538167918011 E75 -Q162 0.333218963010594 E79 -V90 0.323200366326764 G178 -L215 0.32307584460579 M81 -L221 0.322445775853169 H78 -K219 0.319291593136362 H78 -S170 0.316044837931479 G86 -S216 0.288515274836814 H173 -H180 0.283160745672035 M81 -S92 0.281168388800178 C77 -K95 0.280809747454455 E79 -Q162 0.272588653720735 N83 -G178 0.272154972522814 E79 -N217 0.26908982134379 T73 -E164 0.267735544468524 A98 -R160 0.263759832933907 S94 -Q162 0.262595419577803 L74 -S94 0.25443857837978 D80 -Y174 0.24968485503012 D89 -G178 0.248791949170219 C76 -V90 0.247303645354054 C76 -P93 0.243597416031063 S92 -Y174 0.242441437852883 Y84 -L215 0.23721144983481 M81 -E218 0.232644668739686 H88 -S216 0.231505594345813 R85 -S216 0.228789887664602 N83 -L91 0.224593596410417 S92 -S175 0.224306618557058 H173 -G178 0.219885386710973 M81 -D89 0.218948750301115 Y174 -K219 0.217247601206968 P93 -S99 0.215524227164178 C76 -Q166 0.213700159596292 H88 -N217 0.210085126394645 C77 -Q162 0.206146725369535 L87 -N217 0.20295008835704 C76 -S96 0.200846564279785 E97 -R160 0.196187073650692 V90 -I220 0.195703910440487 N83 -L221 0.195698530028436 K95 -S222 0.193801128780879 H78 -L172 0.190838251036816 M81 -S181 0.187731536593096 C76 -G102 0.186876927502037 S92 -N217 0.185314990782703 K159 -E164 0.185187526082079 D80 -L172 0.179580348764061 S96 -R160 0.175363598405686 G178 -N217 0.174095596074278 C82 -L87 0.173290080313261 A98 -D163 0.172937677856677 H78 -E97 0.169163030722417 K95 -S170 0.169052722790472 F176 -S181 0.168605592118343 Y174 -E218 0.168366108759772 S99 -R104 0.166867740259 S92 -H173 0.162879967642696 H88 -K219 0.162278164499466 E79 -Y84 0.16124909441328 S181 -K219 0.160742315142727 Y84 -S181 0.160649262925887 E79 -K219 0.160454987182209 E79 -R160 0.159707177141087 L74 -P93 0.154413385381234 L161 -S170 0.153163654967619 Y84 -H179 0.153060710688711 L74 -S92 0.148696475804456 P93 -Q162 0.14709577063955 S175 -H180 0.144673748148728 K95 -Q166 0.144561239609161 L91 -H179 0.143808662882355 E79 -S96 0.143215610104274 M168 -S222 0.14282758152326 Q162 -M168 0.141268090319883 G86 -G178 0.141177511621554 T73 -S96 0.140596637799087 V90 -L221 0.140309007964735 Y84 -Y174 0.137399575689519 D80 -H180 0.130944773791075 T73 -H78 0.130087281370517 C77 -C82 0.12933199763455 S175 -K182 0.127595306134511 E164 -S170 0.126422908118287 D80 -S94 0.125363097145703 A98 -N103 0.123843640634523 E79 -E97 0.123375487647163 D89 -N217 0.122610633496664 S96 -E164 0.120955519947614 D80 -R171 0.119847374493364 D80 -S175 0.118085817433232 L74 -A98 0.116757529556079 G178 -K219 0.115995768625746 S92 -F176 0.115119931394775 N83 -S92 0.115001383154204 C82 -F176 0.114149146851254 L87 -L215 0.11294308344558 C77 -S222 0.112269043288546 F176 -E218 0.112207075351743 H173 -K219 0.111116776447928 N83 -S175 0.110794167909058 C82 -S222 0.108198983127107 H179 -S216 0.106331935002331 D89 -L221 0.105144382727126 D163 -L169 0.104800587733689 L87 -L221 0.102216944713654 S94 -K159 0.101040482863101 S92 -I220 0.100580323906711 E79 -S222 0.100472861924016 D80 -P93 0.098535809792228 E97 -R165 0.0981987498519528 E79 -D89 0.0980123426441841 Y174 -S181 0.0976515008995626 S92 -K219 0.0965196188352593 C76 -Q101 0.0962546871440098 C82 -H173 0.095571027053011 P93 -M168 0.0941456281070865 E79 -E218 0.0935528180131404 D80 -K95 0.0930811346529491 S96 -Q101 0.092887001665884 S96 -M168 0.0924233523287565 C82 -Y174 0.0911877193265571 T73 -E79 0.0910358027113261 S175 -K219 0.0901124692221988 V90 -H179 0.0890885618586488 H88 -E218 0.0890060091825948 K182 -E218 0.087847100410487 E79 -S175 0.0873426267851665 N83 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