[Mon Aug 29 17:00:49 2016] >Input file: TMQ9DCX7M1G.pdb >TM segments: 118-130_ 169-178_ 181-189 MAIDEN score = 1.1718 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- T119 -I124 0.660393426000535 F177 -F183 0.454156468578948 Y123 -Q172 0.40980048160271 P125 -P185 0.346018197375912 A176 -G182 0.305727247687802 T119 -P127 0.29362273609747 V120 -P125 0.291240352634857 Y123 -P171 0.282357793439799 V120 -D173 0.277499549474164 Q122 -P185 0.244493880971058 N174 -G182 0.22511296490679 Q122 -F177 0.217734076742319 Q172 -F177 0.18072942345031 Y123 -E181 0.153146726885516 Y123 -V187 0.141375670303301 Y123 -Y128 0.135857232133102 V120 -A175 0.125808651461871 Y123 -A176 0.124317810533771 P125 -V187 0.123782526998771 Q122 -F183 0.120326456459711 Y123 -A175 0.119688949658805 A118 -I124 0.117918429581362 I124 -G129 0.115925682084697 V121 -G182 0.113192440434673 P127 -V187 0.111721945149081 V120 -P127 0.103729226797727 Q122 -P171 0.0979953142301149 V121 -E181 0.0963338185594926 A118 -P125 0.0887331386964081 T119 -S130 0.0855270910717777 A176 -S184 0.0837657368538576 A175 -E181 0.0820475371422669 T119 -P126 0.0806098219529998 V120 -Q172 0.0788928101080058 T119 -P125 0.0737014652684804 V121 -N174 0.0694313902692021 D173 -S184 0.0673972285317443 Q122 -D173 0.0670088796044669 F177 -P185 0.0656290232980118 V121 -D173 0.0643954494589298 V121 -P171 0.0587074124157381 V120 -G182 0.05097716397441 I124 -F186 0.0469709912456482 Y123 -N174 0.0445957009389255 P171 -A176 0.0435166706064818 V121 -F177 0.0430328864165614 Q122 -A175 0.0419255787189292 Q122 -Q172 0.0409553565241199 A118 -A175 0.0398537255391265 V120 -F183 0.0349406203573029 V121 -Q172 0.0332485720177962 V120 -P171 0.009860707994374 A118 -P126 0.00840727171621913 V121 -P126 0.00451821580662237 V121 -F183 0.0019985578175743 P125 -F183 0.00113894439255091 P126 -F186 0.000390603935558564 P171 -F177 -0.00369593277996683 Y123 -F186 -0.00809728509982222 V178 -S184 -0.00926633701512358 P125 -S130 -0.0134868714448997 V120 -A176 -0.0138833938437313 T119 -Y128 -0.0178324527795171 Y123 -G182 -0.0200662477584013 Q122 -G182 -0.0207327173024707 V120 -S184 -0.0209095326772045 Q172 -V178 -0.0256357137958194 I124 -P171 -0.026460737239089 I124 -F183 -0.0318984563469811 F183 -G188 -0.0342782731749813 S184 -T189 -0.0406038514999909 P127 -F186 -0.0513049049908236 I124 -D173 -0.0565811278110825 D173 -V178 -0.0614703117321582 Q122 -N174 -0.061732382738679 Y123 -D173 -0.0638784217451036 D173 -F183 -0.0663293609090121 D173 -G182 -0.0695468124242833 P125 -S184 -0.0696248139412825 N174 -E181 -0.0720822789382689 P125 -F186 -0.0767574554461694 V121 -S184 -0.0786485595567727 I124 -S184 -0.0813373575310334 Y123 -P185 -0.0841490325280758 Y123 -F177 -0.0874868788931034 V120 -S130 -0.0905154340925269 I169 -N174 -0.0921250169527585 A175 -S184 -0.0991061726477698 Q172 -F183 -0.10371295780247 V120 -N174 -0.106209228794039 I124 -S130 -0.106554783800407 Q122 -E181 -0.109092562490171 Y170 -A175 -0.109859895786454 V121 -A176 -0.11337882322924 Q122 -S184 -0.113827095405908 Q122 -P127 -0.118533040335821 D173 -E181 -0.125325681150879 N174 -F183 -0.132710594381975 I124 -Q172 -0.134324323968263 A176 -E181 -0.135096623416622 V121 -A175 -0.149790999218449 P127 -T189 -0.1538126791353 Y123 -S130 -0.157571219449057 Q122 -F186 -0.158298827010732 Y123 -F183 -0.176232072980982 Q122 -A176 -0.178778737418064 A175 -F183 -0.18206128798262 V120 -P126 -0.183972388282731 V120 -E181 -0.186690912625865 F177 -S184 -0.195411233420816 A175 -G182 -0.216764884122578 A176 -F183 -0.227930619944736 A118 -Y123 -0.251161406216429 F177 -G182 -0.261372777282833 V178 -F183 -0.285590203583186 Y123 -S184 -0.306815670619315