[Fri Aug 26 16:50:57 2016] >Input file: TMQ9FYK0M1D.pdb >TM segments: 688-699 MAIDEN score = 0.0799 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- D694 -R699 0.350951517662831 A693 -R699 0.104321264697637 V692 -L697 0.0871372920094586 V692 -V698 -0.0911090548316111 A693 -V698 -0.148152693616528 V692 -R699 -0.223255065820132