[Fri Aug 26 16:52:33 2016] >Input file: TMQ9FYK0S5D.pdb >TM segments: A688-704 MAIDEN score = -1.5420 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- G696A-A701A 0.149335019951196 M688A-A693A 0.0239269343453596 A690A-F695A -0.00898416499412225 D694A-R699A -0.0138395726361813 L697A-E703A -0.0279607735995606 G696A-E703A -0.0537950887088137 L697A-P702A -0.0608303058243196 V692A-V698A -0.0615570674349994 V698A-G704A -0.0753705112647962 V692A-L697A -0.0790312908508124 V692A-R699A -0.133510987341773 F695A-L700A -0.134338743191137 A693A-V698A -0.154575320058332 F695A-A701A -0.178458978323786 A693A-R699A -0.188262003817365 R699A-G704A -0.204025732359848 V698A-E703A -0.340696387985168