[Mon Aug 29 17:06:09 2016] >Input file: TMQ9H295M1G.pdb >TM segments: 371-404_ 422-434 MAIDEN score = 32.9619 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V382 -M389 10 V388 -M398 7.76693454383451 P379 -L385 2.03259080239043 P379 -L384 1.47904016984825 W377 -L425 1.42847739713825 L380 -L387 1.26722281779383 L380 -I386 1.24948380462397 V378 -L424 1.23410159773107 L372 -I386 1.16752323317192 W377 -L424 0.979164167350344 V388 -S394 0.925775198889703 S381 -V388 0.842707706544985 L397 -I402 0.81025301043377 L397 -L403 0.785104182806078 I383 -M389 0.746919494060851 L372 -V378 0.737316465392744 L380 -L385 0.732205409906443 W377 -K426 0.731181349509641 V382 -L390 0.727265519907627 V388 -L393 0.710606954411399 L380 -L424 0.695767626935337 L387 -L393 0.678746982491903 L400 -A422 0.67166826933526 L380 -L400 0.655906648643186 F371 -I386 0.62844435997036 P379 -L387 0.621685766653383 L393 -M398 0.614846690678046 V378 -L425 0.583101139739461 L387 -S394 0.568702949057306 L380 -V388 0.564959237552494 L387 -M398 0.563987217388683 V388 -Q399 0.559797489279346 F371 -L385 0.536981742013476 P379 -A422 0.504967664020395 V378 -L385 0.483930988592804 V378 -K423 0.482556154670889 L372 -L385 0.47062261720077 L380 -M389 0.464113911239996 P379 -L424 0.458056860551658 V382 -L387 0.456012507593702 V382 -V388 0.454914529312407 P379 -I386 0.449108784519551 M398 -L403 0.447838374388944 S381 -M389 0.4468022273591 L373 -V378 0.408553366712127 Q399 -V404 0.407876370630263 V388 -L397 0.399782842779492 S381 -L400 0.390075358303838 K426 -P432 0.387694903923766 V378 -L384 0.362573219868573 L380 -A422 0.350568177359252 L384 -M389 0.338698521497348 Q399 -K423 0.331994536148566 V382 -S394 0.321086953049725 K427 -P432 0.320949929838151 V378 -I386 0.290918810419516 V404 -A422 0.289602324346157 V388 -L400 0.275101978804134 M389 -S394 0.251673618872332 S394 -K401 0.239439210655405 S381 -L387 0.224680822607462 L380 -V404 0.221246395096525 L380 -M398 0.212963335303831 S374 -P432 0.212547380892508 L390 -S395 0.209616513691754 M389 -L424 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