[Mon Aug 29 17:08:40 2016] >Input file: TMQ9H9P2M1G.pdb >TM segments: 67-115_ 173-179 MAIDEN score = 59.6193 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L68 -C178 10 I80 -K89 10 L69 -K179 10 L69 -C178 10 I80 -T88 10 V67 -C178 3.13885191496179 L79 -N86 1.3762557867692 I101 -I177 1.20792267472899 L69 -I101 1.13154763249986 L68 -I177 1.11076387836701 L68 -I101 1.1070297070487 L69 -I177 1.10254056169063 I80 -L87 1.10040237059618 L79 -Q85 1.06203913610773 I80 -N86 0.926353266678092 L68 -G102 0.846829577344495 L68 -W100 0.778486269944048 M83 -K89 0.758328788929493 L84 -K89 0.684250509421389 L68 -Y176 0.658622209491964 D96 -H174 0.604239363860481 D98 -Y176 0.559205540881779 F99 -I177 0.520242394589426 I101 -Y176 0.519977143885169 L84 -P90 0.514675193310367 I80 -Q85 0.511237872488115 K78 -N86 0.493676539408561 E76 -P90 0.472076868824686 Q85 -K179 0.454461846406569 E72 -C178 0.444624572491372 V67 -G102 0.440392040999797 G102 -I177 0.428421848634045 E81 -T92 0.426330603878735 G91 -F99 0.422297678358202 P90 -D96 0.416639060262927 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