[Fri Aug 26 16:58:35 2016] >Input file: TMQ9H9P2S1D.pdb >TM segments: C51-72 MAIDEN score = 1.3695 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C61C-V67C 2.42316402476319 C61C-L68C 0.775232032132161 A57C-L68C 0.494744167842147 A60C-V67C 0.380739163978784 L59C-V67C 0.346053764098393 E62C-L68C 0.297014107461937 V52C-C61C 0.255933257467025 F54C-E62C 0.247631678438502 S53C-A60C 0.202245217807755 R51C-E56C 0.194401811283969 A57C-G66C 0.175437315387567 R58C-S70C 0.153846013188515 Q55C-S63C 0.148813548676942 E56C-E64C 0.147831097549287 E62C-S70C 0.144011496927345 Q55C-C61C 0.139389848024833 A57C-E62C 0.139216851385517 R58C-E64C 0.132233644771907 Q55C-E62C 0.130538112632895 V52C-A57C 0.129365982364762 A57C-G65C 0.113884824964529 S63C-L68C 0.110545564989794 S53C-C61C 0.106066046621068 R51C-A60C 0.104251901605738 V52C-L68C 0.101708883231342 E56C-V67C 0.0701339367199054 E64C-L69C 0.0647024165452996 Q55C-V67C 0.0604328184123328 R58C-V67C 0.0603996056881382 C61C-G66C 0.0600007303255419 E56C-C61C 0.0401988993044675 E56C-G66C 0.0226457490536043 F54C-L68C 0.0197908212724132 E62C-L69C 0.0179848646358103 S53C-L68C 0.0166866056295802 Q55C-G66C 0.0127989582501531 R58C-G65C 0.0113508777015287 A57C-S70C 0.00992099381994116 F54C-C61C 0.00185355436103318 E62C-V67C -0.00194816655532826 C61C-S70C -0.00866614733783055 Q55C-A60C -0.0119114139304575 Q55C-E64C -0.0162478045256852 R51C-L59C -0.0192533905957815 E56C-G65C -0.0205731203628998 F54C-S63C -0.0291451763440642 E56C-S63C -0.0327912613696721 G65C-S70C -0.0449839696817751 L59C-E64C -0.0474844238221754 L59C-L69C -0.0523673023551972 Q55C-L69C -0.060296927526035 V52C-E62C -0.0616446957293921 A57C-V67C -0.0624165911090984 A60C-L69C -0.0635957072565336 L59C-G66C -0.0684999340748966 R58C-G66C -0.0710042784358218 C61C-L69C -0.071562574098496 R51C-R58C -0.0717155680669891 F54C-S70C -0.0790922884274605 F54C-L59C -0.0916688856864978 G66C-L71C -0.0973978075159918 R58C-S63C -0.102193483009485 F54C-V67C -0.104471169017933 S53C-R58C -0.107059633966916 F54C-L69C -0.116660553766894 A60C-G65C -0.14169012780549 V52C-R58C -0.141698593577945 E56C-E62C -0.146313127107651 V67C-E72C -0.148715297452488 E56C-L69C -0.149246792050243 S53C-L59C -0.172922961485182 R51C-A57C -0.177945659150951 S63C-L69C -0.179270457116938 A57C-S63C -0.193523361434161 R58C-L69C -0.200396510624794 E56C-L68C -0.210823164839219 A57C-E64C -0.2298051241128 F54C-A60C -0.229900345632776 V52C-A60C -0.237532433196047 V52C-L59C -0.248354049611478 A57C-L69C -0.252590486242081 L59C-G65C -0.258900709460532 A60C-L68C -0.281109583291013 L59C-L68C -0.311939886569711 R58C-L68C -0.335159560639619 Q55C-L68C -0.45338984386971 A60C-G66C -0.477815273501037