[Mon Aug 29 17:14:23 2016] >Input file: TMQ9IAR8S1G.pdb >TM segments: 391-396_ 463-484_ 598-616_ 652-669 MAIDEN score = -5.2937 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- M469 -L474 1.7787732369341 V393 -H483 1.35899521718301 M468 -L474 1.33747840007684 L395 -I481 1.30614952918882 L609 -I615 1.06414515105209 V396 -I481 0.857424010957782 M468 -E473 0.745549013515543 L609 -K614 0.6789604996334 M469 -V475 0.598399012542306 S465 -L474 0.558790595630449 T603 -H608 0.557568789124123 I652 -R657 0.475983857691206 K463 -V602 0.419136663021704 S464 -V602 0.413911103270096 M469 -P476 0.353285994989775 V393 -I481 0.351735669428926 T603 -L609 0.346070356960909 M469 -I481 0.332238309582038 K605 -R611 0.318549877063341 I660 -R666 0.311528294990516 L661 -R666 0.29631480346834 E394 -T598 0.291294122614334 E473 -H483 0.290866187491864 E392 -R599 0.287476258077662 R656 -L661 0.28218911725644 V601 -D613 0.279763444445901 R657 -E663 0.279200920600857 L395 -G479 0.277829702216688 M469 -V601 0.269936947688038 V396 -K480 0.268362664788164 V393 -D613 0.264156427199802 V396 -E478 0.259825337930603 V393 -S484 0.25973549355283 E663 -V668 0.258792402102642 K463 -M468 0.247393691409625 T391 -T598 0.246035131722035 S604 -L609 0.236272508044602 D607 -K614 0.227847978035632 S464 -P476 0.215266917059762 T598 -I615 0.204860500394952 V602 -L616 0.195429411177764 I470 -K482 0.190776779770467 K653 -L661 0.184575350189762 L395 -S484 0.178827251971491 E392 -K614 0.17831666017396 I600 -H608 0.177911569273452 M468 -S477 0.17491135613216 R599 -K614 0.174082025771448 S464 -L616 0.173037153841039 V396 -H483 0.172663248464206 M468 -V601 0.172253830062006 S465 -S477 0.171499513951672 K482 -T598 0.16822631066247 K463 -L474 0.167412818520436 S658 -R666 0.164755774969992 K610 -L616 0.156798040039612 R599 -D613 0.152147587353451 V393 -V601 0.151960819870693 V601 -R611 0.150913950306443 L467 -V602 0.150829361370361 V396 -M469 0.147718453587563 E392 -K480 0.143496887371731 H608 -D613 0.142693136081237 G472 -H483 0.141673969918399 K463 -I615 0.135816395862121 L395 -S477 0.135351209016642 K610 -I615 0.133046633798212 L466 -I615 0.132393174834558 L395 -L471 0.131751102826639 I470 -T598 0.129071738265762 L466 -V601 0.128620330704653 L395 -I615 0.126110179529609 L395 -M468 0.125159169789002 L471 -P476 0.121003934934593 V602 -D607 0.119874604710741 T603 -K614 0.116840209950185 K605 -D613 0.116374996338678 L467 -V475 0.11636388700155 S604 -L616 0.115925510844165 I470 -G479 0.111618241877044 L471 -K482 0.11039077791735 V601 -I615 0.109262108328149 V396 -K482 0.10863618900218 L395 -L616 0.108435364300201 I600 -I615 0.10774455046928 L471 -S484 0.107687489356711 V396 -L466 0.102840978284812 E655 -L661 0.102409997991004 T603 -R611 0.101118874862327 G472 -K482 0.101028430716482 K463 -L471 0.0970689075291324 T598 -A612 0.0967735779593901 I600 -A612 0.096759372889796 V601 -L609 0.0941644107421542 V396 -L616 0.0931018008746216 S659 -S669 0.0914733701690587 I470 -L616 0.0909719802761581 V393 -G479 0.0909123061956045 E394 -M468 0.0897715571385939 L661 -V668 0.0887016780469829 D607 -A612 0.088251593826064 K605 -L616 0.0880275748229189 L466 -E473 0.0877112909507807 S484 -T598 0.0867313518783392 V475 -K482 0.0864712758329378 E655 -E663 0.086373582209256 R599 -L609 0.0860819475369902 L395 -V475 0.0851572186776535 R611 -L616 0.0842603453646691 E392 -S484 0.0828426576265562 S465 -V601 0.0817485802681253 I481 -I600 0.0784407999925414 L395 -K482 0.0759508687112813 G472 -G479 0.0758856208410842 L466 -R599 0.0751504687907089 V601 -K610 0.0751149600165193 V393 -G472 0.0731581643843779 E392 -T598 0.072726847575836 V396 -S477 0.0712042688226218 E394 -K614 0.0695000831700607 E394 -E478 0.0675877696425654 V601 -M606 0.0675820677859429 S464 -T603 0.0657895267282651 V393 -L467 0.0599246870839316 L395 -I600 0.0597394880461406 K653 -T662 0.0596125766872102 R656 -T664 0.059531037727127 V602 -A612 0.0579957615107838 M469 -S484 0.0546330195896623 I470 -R599 0.0537533506304144 S604 -I615 0.0537048467603838 E394 -I615 0.0534915702951784 S604 -A612 0.0529582126343406 E394 -L467 0.0529442064292649 V602 -R611 0.0505884374974104 K463 -E473 0.0504806458626463 V393 -L616 0.0498818335729467 L466 -L474 0.0484120749461319 L471 -R599 0.0464196068406819 S464 -E473 0.0451750232000636 T603 -K610 0.0439195097406184 H608 -L616 0.043616512028259 L467 -I615 0.0411035592388673 V602 -D613 0.0410835043279434 S658 -E663 0.03903080587029 L661 -S669 0.0385975646434462 I470 -I481 0.0379626248446012 G472 -S484 0.0355949352328431 V393 -I600 0.0353766068306225 V602 -K614 0.034238654309488 L474 -H483 0.0336359170614489 G472 -S477 0.0331702861393778 T598 -K614 0.0331402896877311 S464 -G472 0.0330368789627166 I470 -V602 0.0325213077371633 S604 -K614 0.0309931825316725 M468 -V602 0.0304790220009399 L467 -H483 0.0289668034048445 R657 -R666 0.0281996608797073 L609 -L616 0.0281409919244542 I600 -R611 0.0279685923634978 H483 -I600 0.0264425238399093 R599 -L616 0.0259909629963238 R656 -E663 0.0250862870689321 V393 -K614 0.0244055106981358 L466 -T603 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