[Fri Aug 26 17:06:18 2016] >Input file: TMQ9IFX2M1D.pdb >TM segments: 1300-1324 MAIDEN score = 13.2438 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- D1312 -C1320 10 V1315 -C1320 2.32784703818311 I1314 -C1320 0.587974817968396 V1308 -I1314 0.567487657478443 D1312 -F1319 0.369927940716708 I1314 -G1321 0.315671504697192 S1313 -C1320 0.313594257034468 D1312 -V1324 0.306881234289047 V1315 -G1321 0.286577987926712 C1310 -F1319 0.260345947902214 R1311 -G1321 0.251435892846544 P1305 -S1313 0.239383968945948 K1307 -D1312 0.227493606972912 I1314 -T1323 0.195942255862151 V1308 -S1313 0.195547502151271 I1314 -F1319 0.173714022329303 C1310 -G1316 0.159808548948852 R1311 -C1320 0.158759943355354 K1307 -I1314 0.15203117736596 G1316 -F1322 0.120299151787531 M1301 -G1306 0.118962850567394 V1308 -G1316 0.104371656460726 R1311 -F1322 0.103781560503172 I1309 -G1321 0.0996598841359119 R1311 -T1323 0.087995826807588 V1308 -G1321 0.0821048717641856 P1305 -I1314 0.0709313156719276 V1303 -V1308 0.0672351900546753 G1306 -V1315 0.0551353649855546 D1312 -S1318 0.0469410950763889 G1306 -S1313 0.0448541217938754 G1300 -P1305 0.0418312268201892 G1300 -G1306 0.0325672310005611 G1306 -G1316 0.0289814631841367 K1307 -V1315 0.0250630710115646 K1304 -I1314 0.022449805592851 W1302 -L1317 0.0212837458918989 V1308 -C1320 0.0207119015422226 P1305 -V1315 0.0186131097975752 R1311 -G1316 0.0111579264140638 R1311 -F1319 0.00249726764289981 P1305 -L1317 0.00199517503998514 S1313 -T1323 -0.0179961679492355 G1306 -R1311 -0.0206398829065382 S1313 -S1318 -0.0235280916357286 F1319 -V1324 -0.0255687429342618 V1303 -V1315 -0.0379425858359235 K1307 -G1316 -0.0399532905751299 I1309 -C1320 -0.0426136570329358 P1305 -G1316 -0.0436519849458241 C1310 -T1323 -0.045386798362475 P1305 -C1310 -0.052855091253889 G1306 -D1312 -0.0576695673267946 K1307 -S1313 -0.0581700613477564 S1313 -F1319 -0.0592536065752811 R1311 -L1317 -0.0598190609836613 I1309 -G1316 -0.0612345788627739 V1315 -T1323 -0.0746087331491685 D1312 -G1321 -0.0769694960634795 C1310 -G1321 -0.0827371869812872 D1312 -L1317 -0.0874409419169474 I1309 -F1322 -0.0939051666988706 S1313 -V1324 -0.0965519949167035 M1301 -K1307 -0.104421525726773 I1314 -F1322 -0.104717793979905 C1310 -C1320 -0.105406488327537 R1311 -S1318 -0.110306548990134 D1312 -T1323 -0.115084676063882 L1317 -F1322 -0.125750029447783 C1310 -F1322 -0.141085071512689 S1313 -F1322 -0.142058752327432 C1310 -V1315 -0.166119412665762 I1309 -I1314 -0.177686097553021 K1304 -V1315 -0.202153514725163 S1313 -G1321 -0.207083312261918 G1306 -I1314 -0.209303407312835 I1309 -V1315 -0.220311132874374 R1311 -V1324 -0.243015719388683 G1316 -G1321 -0.294995099958374 V1315 -F1322 -0.321500028341304 V1308 -V1315 -0.353123356543099 D1312 -F1322 -0.573406236980373