[Mon Aug 29 17:18:03 2016] >Input file: TMQ9JME9S1G.pdb >TM segments: A39-58 MAIDEN score = 1.1271 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V39A-I45A 0.872858686646733 F51A-A56A 0.620352733789954 P48A-T57A 0.281102364904131 P48A-S58A 0.194110226387268 A50A-S58A 0.181733609417954 C49A-T57A 0.175279352378182 V39A-E46A 0.154728103662207 A50A-A56A 0.105151175223921 R40A-I45A 0.104116262105191 R40A-E46A 0.0840676292527922 C49A-S58A 0.0832084357653771 E41A-E46A 0.0822057697582056 C49A-S54A 0.0654405583790107 R52A-T57A 0.0615250922402086 P48A-S54A 0.0502464184336304 F51A-S58A 0.0354460997721802 A50A-G55A 0.0152680007454573 P48A-G55A -0.0130290358381592 C49A-G55A -0.0291380361786988 M47A-A56A -0.0434186867896371 V39A-P48A -0.064604093206539 V39A-M47A -0.132874860707179 A50A-T57A -0.13897954447773 P48A-A56A -0.148156928884992 C49A-A56A -0.221933106638493 R40A-M47A -0.277978651073691 F51A-T57A -0.421152587245501 V39A-D44A -0.548515042035397