[Fri Aug 26 17:16:48 2016] >Input file: TMQ9LK43S12D.pdb >TM segments: B652-662_B720-729_B760-772_B899-911 MAIDEN score = 9.7137 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- M656B-D725B 10 Q658B-H899B 1.83821581841955 N660B-H899B 1.35784647792221 Y655B-A724B 1.30993047806399 E654B-A724B 0.89582715156644 Y655B-V723B 0.809015683812686 M656B-F726B 0.734857750961807 E654B-D725B 0.613810533122324 Y653B-D725B 0.41383857769961 V760B-D765B 0.283738606073401 P657B-Y904B 0.274343588517965 D901B-Q906B 0.274175542311731 G659B-S903B 0.269029899473354 P657B-H899B 0.246593608269018 D725B-D765B 0.245397212920207 V723B-D765B 0.237971469762933 Q658B-Q906B 0.233178234708234 E654B-G727B 0.226441599529295 P657B-S903B 0.192869498297928 Q658B-K722B 0.187536761152126 T761B-A768B 0.180229437586086 S903B-S909B 0.179488713189321 V652B-D725B 0.162671937217691 V723B-A768B 0.148482329697698 N660B-R720B 0.14350499636715 D765B-V772B 0.142389483973096 V723B-V766B 0.134072391994347 K763B-V771B 0.130120035909802 Y655B-A721B 0.129036372840205 A721B-V772B 0.127979858451938 Q658B-F902B 0.127798989300226 E654B-G659B 0.127603783278774 V652B-A724B 0.114113611695048 Y655B-K722B 0.11146995225994 E654B-K722B 0.110404465050153 Q658B-S905B 0.109300217560618 G662B-A724B 0.10660357310081 Y655B-D725B 0.105184630138479 P657B-K722B 0.0834456753623982 V652B-G727B 0.0803019829613003 A724B-F769B 0.080098930739358 V729B-V766B 0.0788983136847872 V723B-L728B 0.0788715216626601 L661B-V771B 0.0786881139383317 P657B-D725B 0.0727421431440614 K763B-G770B 0.0718415444483709 A721B-F769B 0.0641865838642925 G662B-A768B 0.0616847781552037 Y653B-Q658B 0.0611398325053196 Q906B-I911B 0.0585251227366377 A724B-V729B 0.0582481300545119 N660B-S903B 0.0578587052785837 L661B-A724B 0.0539562118604133 G662B-K722B 0.0512425938534138 V652B-Q658B 0.0485639654772583 G659B-F902B 0.0421604806409048 P657B-A721B 0.0412202017546415 V729B-D765B 0.0405334638653745 Y655B-N660B 0.0399530551107063 E654B-F726B 0.0393913923144265 L728B-A768B 0.0387740531961525 T761B-F769B 0.0382904694618409 F902B-Q908B 0.0371687429633812 Q658B-A724B 0.0326593208463404 N660B-D725B 0.0286616835245212 Q658B-D901B 0.0232978148716327 F726B-T762B 0.0228857785532961 L661B-F769B 0.0184833264009669 P657B-G727B 0.0183650896079313 M656B-L728B 0.0175030648467249 L661B-G900B 0.0169361560737902 H899B-Q906B 0.0168738597640364 M656B-H899B 0.0168397779308496 G662B-V771B 0.0141830214189023 M656B-L661B 0.0127192414670763 A721B-F726B 0.00863385378485848 V723B-V772B 0.00751857810849899 Y655B-F726B 0.00726677536140841 M656B-A721B 0.0068500314479043 V729B-K763B 0.00329067105929415 L728B-T762B 0.00187320113237188 A724B-V772B 0.00138712710720323 L661B-G770B 0.000428998447270401 L728B-D765B -0.00256434435423003 V729B-T761B -0.00672634777470016 G659B-R720B -0.00775241796723236 V760B-A768B -0.00885717720945634 D765B-G770B -0.00980503838844049 G659B-D725B -0.00998563310538014 G662B-A721B -0.0100273921711249 V729B-V760B -0.0116168393138856 M656B-V723B -0.0123209306008807 Y655B-L728B -0.0125977860055286 A724B-A768B -0.0158323925427126 Y653B-K722B -0.017108034570136 G662B-D725B -0.0178625105733279 P657B-G662B -0.0204972079203793 G659B-D901B -0.0208803247266025 Q658B-G727B -0.0229701823628334 F726B-A768B -0.0236596235095323 G727B-D765B -0.0248448720668741 Q658B-A721B -0.0260915927194594 V652B-F726B -0.0269360342600695 V729B-A768B -0.0274002021744209 V764B-V772B -0.0305649720171974 G900B-Q906B -0.0317477046843604 G662B-S903B -0.0323073069038124 Q658B-F726B -0.032633970521986 T761B-Y767B -0.0339747548393466 Y653B-V729B -0.034644495910567 Y653B-L728B -0.0352279342034656 G659B-A721B -0.0358796022224199 Y653B-G659B -0.0370412453350859 G662B-D901B -0.0375961808231986 G662B-V723B -0.0396894974078288 G659B-S905B -0.0409674808050366 H899B-Y904B -0.043798999872283 P657B-G900B -0.0447012227524963 L728B-K763B -0.046262616670098 M656B-V729B -0.0473988318385792 T762B-F769B -0.0490552086936522 L728B-V764B -0.0506013047902272 T762B-G770B -0.0506045383888459 G900B-T907B -0.0509809270647845 K763B-V772B -0.0542788256119193 G662B-G900B -0.0576382887199269 E654B-A721B -0.0636680355228849 G662B-F902B -0.0649851682407823 Y904B-S909B -0.0655960826681117 N660B-D901B -0.0657078153983974 Y653B-V723B -0.067448468509137 G659B-Y904B -0.0682648837774478 M656B-G727B -0.0684698405188477 N660B-Y904B -0.0695277431182122 V760B-V766B -0.0731514059559659 Q658B-S903B -0.0766551865924945 V723B-F769B -0.0770407303628096 P657B-A724B -0.0796191500851209 N660B-V772B -0.0800152929234471 V723B-V729B -0.0802866012163799 S903B-Q908B -0.0859715828475336 L661B-V772B -0.0864867552578232 L728B-T761B -0.0873380065714158 V760B-Y767B -0.0875016734138181 P657B-L728B -0.0875532568598958 L661B-A768B -0.0893520172269486 D901B-Q908B -0.0931214747527978 T762B-Y767B -0.0949001426737697 Q658B-D725B -0.098553179492924 M656B-K722B -0.0989979378525179 L728B-V760B -0.101110303247832 N660B-G900B -0.10256897904362 Y655B-G727B -0.10820632965184 V729B-V764B -0.110394128525904 Y655B-V729B -0.110681144473515 Y653B-G727B -0.111493372317628 P657B-R720B -0.113323976230209 K763B-A768B -0.11519179802339 M656B-A724B -0.122691081694703 G659B-V723B -0.123179503758559 L661B-D725B -0.124290498458692 H899B-T907B -0.126802531100917 G662B-F769B -0.130613021399771 F902B-T907B -0.131782948492633 P657B-F726B -0.133510528341174 G662B-R720B -0.134739160066754 Y653B-F726B -0.137769959118568 H899B-S905B -0.143214355576696 D725B-A768B -0.152896684172658 T762B-A768B -0.157693723477335 F726B-D765B -0.157722331743948 L661B-K722B -0.158142610585861 G659B-A724B -0.159594637489242 N660B-K722B -0.161163236030519 Q658B-V723B -0.161573811208824 N660B-A724B -0.162320805663504 Y767B-V772B -0.162743880512298 E654B-L728B -0.164277228035089 L661B-V723B -0.165266684627238 G659B-G900B -0.166227390365179 A724B-D765B -0.16856709458454 V652B-P657B -0.172689175367203 N660B-F902B -0.179797097208153 M656B-G662B -0.180250295982741 K763B-F769B -0.184044760131506 V766B-V771B -0.18540326437709 L661B-R720B -0.186982691594234 D901B-T907B -0.189257234680356 E654B-V729B -0.190855435842184 G659B-H899B -0.192156874525174 G662B-V772B -0.19226663848371 G659B-K722B -0.195075383910378 K722B-V772B -0.201616908128599 V764B-G770B -0.205761385140168 G662B-H899B -0.223913869100277 N660B-A721B -0.226598394687159 E654B-V723B -0.243790405375212 V729B-T762B -0.25883175999693 G900B-S905B -0.263749840472841 L661B-H899B -0.264137851616125 T761B-V766B -0.269306453491226 V764B-V771B -0.274572297070118 Y653B-A724B -0.276469364757098 N660B-V723B -0.282496943752474 P657B-V723B -0.283253516216645 D765B-V771B -0.298648562149331 L661B-A721B -0.302842022909318 V764B-F769B -0.313652774693227 Q658B-Y904B -0.326461325472469 V766B-V772B -0.341337662354124 K722B-F769B -0.34750575109322 Q658B-G900B -0.358146924988388