[Mon Aug 29 17:27:21 2016] >Input file: TMQ9LNK3S3G.pdb >TM segments: A490-518 MAIDEN score = 7.5482 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I491A-I513A 1.6062304250803 L490A-I513A 1.23696927763323 E492A-I513A 1.17854249726126 L495A-L517A 1.13898873558399 L493A-I513A 1.12386820260703 L493A-L515A 0.912404568043777 L490A-L511A 0.741470788968178 E492A-S514A 0.567653638455268 Q497A-L517A 0.543701829611813 L495A-S518A 0.471822400363262 P508A-I513A 0.426688418054202 E492A-P508A 0.405469168137302 L493A-S514A 0.357016453663588 P505A-K510A 0.355019184112443 I491A-S514A 0.280039500088598 Q494A-R501A 0.230470678993801 Q497A-N516A 0.225942215956918 P508A-N516A 0.217832120296265 L495A-P508A 0.210927731315847 Q494A-L515A 0.201643576115207 P505A-S518A 0.193405625724385 M507A-L515A 0.191894671365008 G496A-S514A 0.188099680827452 P505A-L517A 0.183258502932216 P505A-Q512A 0.17373264675818 L495A-P505A 0.172505341755016 P508A-L517A 0.171518013925077 Q494A-S514A 0.166573300994556 R509A-S514A 0.165437392856345 L490A-N516A 0.158898741835785 I491A-N516A 0.154680558784046 P505A-L515A 0.144479263128323 P505A-L511A 0.141796016957336 I504A-N516A 0.136843554966418 L495A-N516A 0.133834978476346 L493A-N498A 0.13268941186292 R501A-S518A 0.132382922257631 E492A-K510A 0.128417636238578 Q499A-I504A 0.127144013817921 G496A-I513A 0.123502391500071 Q494A-I504A 0.122863214514979 I504A-S518A 0.11956023106013 L493A-S518A 0.115798373544369 L490A-L495A 0.115517428131987 K510A-L515A 0.111989979759011 L493A-K510A 0.111912518829815 Q494A-L517A 0.111449484386113 E492A-S518A 0.109744587618251 E492A-L511A 0.108984731607958 L493A-L500A 0.108764061006826 L493A-N516A 0.106316387758165 I491A-L511A 0.106046281658706 L493A-P505A 0.103627991178136 R503A-P508A 0.102570403911828 L500A-L515A 0.098762701567106 L495A-L511A 0.0973808961392555 Q497A-S518A 0.0969680682831695 L490A-L517A 0.0958295326442316 Q512A-L517A 0.0926232565924832 I491A-M507A 0.0925710339344095 L493A-Q512A 0.091326422260388 E492A-M507A 0.0897715571385939 L493A-M507A 0.0894378787883605 M507A-I513A 0.0892778670885392 L493A-L517A 0.088914882104747 G496A-G502A 0.0877352663216815 I491A-P508A 0.083579735514945 L500A-N516A 0.0801317751989323 L495A-R503A 0.0755180792868692 L490A-R509A 0.0722925658471845 L511A-L517A 0.0720335578126701 V506A-Q512A 0.0690921686777957 G496A-I504A 0.0645387125124701 G502A-P508A 0.0631411031521081 G496A-L515A 0.062653786163084 L495A-R501A 0.0617152750439116 Q497A-L515A 0.0472183172564105 L500A-P505A 0.044784034447698 I491A-K510A 0.0296003217939331 M507A-S514A 0.0293065201392722 G502A-L517A 0.0286786117000029 N498A-L517A 0.0279640065542264 I491A-R509A 0.0277819067962088 V506A-I513A 0.022894562175755 P505A-I513A 0.0186267854679771 N498A-N516A 0.0180572593307652 M507A-Q512A 0.015316814846364 M507A-L517A 0.00296774389065479 I504A-K510A -0.000863215542437068 R501A-N516A -0.00393855583860514 G496A-L517A -0.0053503977805458 L495A-G502A -0.00982191977915248 G502A-S518A -0.0191006004183055 N498A-R503A -0.0195509046508204 R503A-N516A -0.0203094564866801 L490A-M507A -0.0206933431488912 G496A-R501A -0.0236067072944997 R503A-L517A -0.0341789702379103 R509A-N516A -0.0350733519961815 Q494A-P508A -0.0365951911249423 L495A-Q512A -0.0370103135838589 I504A-S514A -0.0389638067558211 Q494A-Q499A -0.0395814379964547 R503A-R509A -0.0422129008830869 L493A-L511A -0.0489980830867971 I504A-L517A -0.0510986013877961 L493A-V506A -0.0525959315842712 L490A-P505A -0.0529026205548266 V506A-L515A -0.0558160475904002 R503A-L515A -0.0567942454347454 Q494A-L511A -0.0576179839010478 I504A-L515A -0.0606455502087604 L495A-I504A -0.064915027800855 I491A-L517A -0.0655177695563012 Q499A-N516A -0.0655807746277347 Q499A-S518A -0.0664549851792913 E492A-L517A -0.0736514332347262 R503A-S518A -0.0832111500292267 L495A-I513A -0.0837640542242535 L511A-N516A -0.0846014510289894 I504A-I513A -0.0848694194056403 R509A-L515A -0.0864550748408774 Q494A-L500A -0.0916630779794732 L495A-S514A -0.0944277460841239 P505A-N516A -0.0963661202989725 N498A-S518A -0.0969762116230026 V506A-L517A -0.10275659364008 Q494A-P505A -0.104605361671782 I504A-R509A -0.105373060712573 I513A-S518A -0.110733012712261 I504A-L511A -0.1207833049897 E492A-L515A -0.121254460561917 N498A-I504A -0.128895282422455 N498A-L515A -0.129240399266088 L493A-I504A -0.131494584237021 G496A-R503A -0.133587459202077 G502A-M507A -0.135108691064572 I504A-Q512A -0.144113436700422 L493A-R509A -0.146870715484131 R509A-L517A -0.152522474085842 I491A-L515A -0.154235619967286 L490A-Q512A -0.158040986470094 E492A-R509A -0.165084154515417 Q494A-S518A -0.168591601833756 Q494A-Q512A -0.169781946298764 L500A-L517A -0.177909366783373 R501A-L517A -0.183492737961273 L495A-L500A -0.185039635453093 I491A-Q512A -0.185044125204568 L490A-K510A -0.197294258863599 E492A-N516A -0.219147410532478 L500A-S518A -0.257040305834234 P508A-S514A -0.25910463619971 R501A-V506A -0.264209086443037 L495A-L515A -0.28439752383351 L490A-S514A -0.289839479202857 V506A-L511A -0.301371529011956 L490A-L515A -0.302072869809598 E492A-Q512A -0.302324112865532 Q494A-I513A -0.309663091972778 Q499A-L517A -0.373977093716753 P508A-L515A -0.438254292390704 L493A-P508A -0.457661505412661 G496A-N516A -0.47452632643817 Q494A-N516A -0.505790382843313 L490A-P508A -0.562385456335937 G496A-S518A -0.613799455858488