[Mon Aug 29 17:27:55 2016]
>Input file: TMQ9LNK3S8G.pdb
>TM segments: D331-340_D345-351_D355-365_D369-376

MAIDEN score = 13.5488

Below is the ranking list of the residue pairs and their related pseudo-energy
(the lower, the better). This includes inter-chain residue pairs.

The maximum (least favorable) pairwise energy value has been set to 10.
See the MAIDEN software article:
Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161.


-----------		----------------
Calpha pair		Empirical energy
-----------		----------------
V346D-L370D		10
P338D-P360D		1.52533940273927
V346D-L369D		1.32664468174606
L350D-M375D		1.16691232215748
L345D-L370D		0.921442244899991
L348D-L373D		0.896206508283123
V346D-T371D		0.894658827143598
L350D-D376D		0.802976584954221
L345D-L369D		0.679864514794259
P338D-F364D		0.518385174754447
L348D-Y372D		0.494639569934216
P338D-A363D		0.487024811012368
R349D-Y372D		0.412732858773838
E365D-T371D		0.348703976932035
I337D-P360D		0.331075899745354
S340D-V362D		0.30471452629229
S340D-F364D		0.293570966309593
L348D-L370D		0.288395266903037
R347D-L369D		0.270393501024977
P338D-S361D		0.26974258559115
V334D-L355D		0.254179684066047
Q339D-E365D		0.251812259421663
S340D-L345D		0.248968947652715
L350D-T356D		0.241980892263546
G351D-M375D		0.236093004938136
R347D-M375D		0.235527117698541
S340D-S358D		0.225378723083979
Q332D-T356D		0.204878350899086
Q339D-P360D		0.200583376128975
W336D-G357D		0.192325697709408
N331D-M375D		0.191633064407969
L355D-P360D		0.191464979880184
T356D-D376D		0.18908833343798
L370D-M375D		0.185160019440819
G335D-M375D		0.182380050269147
E365D-Y372D		0.178017414143905
S361D-M375D		0.176775478573119
S340D-V359D		0.173463183143717
E365D-L370D		0.171098675783382
L333D-G351D		0.169467370892859
L333D-T356D		0.16571887095402
V359D-E374D		0.158266119898282
V334D-G357D		0.15552254254679
Q339D-A363D		0.150276225440262
R347D-D376D		0.140586942149242
W336D-S361D		0.137394626105777
I337D-E365D		0.13174933084344
G351D-D376D		0.126370851164222
N331D-E374D		0.124876612762748
I337D-V362D		0.124637044359495
G351D-E374D		0.118507270925804
S340D-E365D		0.118333929814134
E365D-E374D		0.117005465525476
V359D-F364D		0.116368098011446
G351D-V359D		0.113885143581513
Q339D-S358D		0.113663740650442
Q332D-R349D		0.113004374249731
L333D-M375D		0.110629839514957
Q339D-V362D		0.109819307920015
S340D-V346D		0.109255351565373
S358D-A363D		0.108734117432612
L348D-P360D		0.108516655190583
V346D-A363D		0.107538827659431
N331D-L350D		0.103852021156715
G351D-T356D		0.0981163832000751
L350D-L370D		0.0966610133945345
G335D-R349D		0.092144143457487
F364D-E374D		0.0897896501175923
L345D-A363D		0.0897102745447369
V346D-E374D		0.0892451780840702
L345D-L350D		0.0884979394761238
I337D-L373D		0.0884804598712514
Q332D-L355D		0.0866754092281909
L348D-V359D		0.0843340791040221
V334D-V359D		0.0840925475022747
V334D-G351D		0.0822565477481687
G335D-G351D		0.0815350887007495
A363D-L369D		0.0811833673352911
G351D-L373D		0.0798719100804399
Q339D-L348D		0.0786231980046082
F364D-L370D		0.0771996166165434
G351D-G357D		0.0728336045955266
S340D-L348D		0.0709635478570267
G357D-M375D		0.0702142932809489
S340D-L369D		0.0699413223028813
I337D-L348D		0.0668814816762726
N331D-T356D		0.0654934717519149
R347D-Y372D		0.0646951054265577
W336D-V359D		0.0627038670265536
P338D-E365D		0.0624540072727964
L348D-E365D		0.0564001165436401
R349D-V359D		0.0530354297055671
S358D-D376D		0.0527617503631219
G335D-S358D		0.0511479317629666
I337D-F364D		0.0439322557335649
G357D-V362D		0.0417838962324382
L333D-L348D		0.0410449406412248
F364D-M375D		0.0377555269079903
W336D-F364D		0.0367963589844615
G335D-S340D		0.0361028849737585
V346D-F364D		0.0334913390922598
R347D-F364D		0.0316746674202419
R349D-T356D		0.0315989863793649
P360D-M375D		0.0299159483445948
F364D-L369D		0.0252363330791643
L348D-F364D		0.0242424090826283
R349D-T371D		0.0229724813693082
V346D-Y372D		0.0225848541145659
I337D-L345D		0.0220846565908275
S340D-L370D		0.0204376043776051
V359D-L370D		0.0199218304114974
L350D-G357D		0.0192814510763295
V346D-E365D		0.0162079145471927
V334D-L348D		0.0157736914914959
P338D-L355D		0.0106182641962107
I337D-R349D		0.0104672228861498
S358D-E374D		0.00934515403895331
V359D-L373D		0.0090879093732017
R349D-L373D		0.00385795289638757
S358D-E365D		0.000506268017367528
L355D-L373D		5.73723824590644e-05
S340D-L350D		-0.000806715402513081
P338D-G357D		-0.00111784317328567
P338D-L373D		-0.00233861623856413
T356D-S361D		-0.00328416468166104
E365D-L373D		-0.00813182215727792
G351D-Y372D		-0.0097344076679029
P338D-V362D		-0.0098472583272925
G335D-P360D		-0.011334826755435
L355D-E374D		-0.0113383973951691
G335D-L355D		-0.0145396119059313
I337D-L350D		-0.0149877275743799
L350D-L373D		-0.0201096320621321
S340D-S361D		-0.0220239393522119
Q339D-V359D		-0.0222138259800765
L333D-G357D		-0.0229998176496684
V334D-Q339D		-0.0238700941021734
R347D-E374D		-0.0273650760875175
Q332D-G351D		-0.0282754929715888
F364D-T371D		-0.0283315010229386
V359D-D376D		-0.028960679868999
Q339D-L345D		-0.0300231618556719
G335D-L348D		-0.0310153352778377
V334D-M375D		-0.0325050489251755
S340D-Y372D		-0.0342366382957353
W336D-A363D		-0.0355058697712183
L345D-E365D		-0.0391344862629834
L348D-D376D		-0.0400413344956363
S340D-T371D		-0.0415566091654726
W336D-R349D		-0.0423838197714792
I337D-M375D		-0.042401724367604
L350D-P360D		-0.043445085700816
G351D-S358D		-0.0450224957389942
L333D-L350D		-0.0455079444600992
W336D-S358D		-0.0456453132500196
W336D-L348D		-0.0469794369323147
V359D-Y372D		-0.0472408939738287
Q332D-D376D		-0.0505109527619521
G335D-F364D		-0.0524377353772735
S361D-L373D		-0.0596157490508644
P338D-L370D		-0.0601151158716267
S340D-L373D		-0.0611020761413048
V359D-E365D		-0.0612103058901283
R349D-F364D		-0.0622281254145318
A363D-L373D		-0.0628765505740505
S361D-L370D		-0.0647122067479193
L350D-S358D		-0.0671158650685912
L350D-V359D		-0.067895017151705
Q339D-L370D		-0.0690398498699976
L345D-E374D		-0.0732666546321471
S340D-R347D		-0.0740390945620418
P338D-L350D		-0.0742271731647257
R349D-D376D		-0.0757230216479959
P338D-S358D		-0.0785897365687704
Q339D-S361D		-0.0789294285846785
W336D-M375D		-0.0798536257070577
R349D-L370D		-0.0805085913686652
V359D-M375D		-0.0829404164509695
G357D-F364D		-0.0843101927966465
L350D-E374D		-0.08774456085172
S358D-M375D		-0.0891953854267204
V334D-R349D		-0.0894614671094081
L333D-R349D		-0.0897814478630936
L333D-D376D		-0.0898969246953829
I337D-L355D		-0.0925786905217706
V334D-S358D		-0.0949686402315175
L350D-T371D		-0.0953621303875414
S340D-P360D		-0.0961396603193581
S358D-F364D		-0.0983336117777123
R347D-T371D		-0.098987650953096
L348D-A363D		-0.0991735054057692
P360D-L373D		-0.100202037372854
G335D-L350D		-0.100279730275865
S340D-R349D		-0.102109419394275
R349D-L369D		-0.104318580610685
G357D-D376D		-0.105323129437694
A363D-L370D		-0.107667356692385
L350D-F364D		-0.108843553648544
R347D-L373D		-0.109478959839429
W336D-V362D		-0.112014910505947
R349D-P360D		-0.113414459696331
P360D-L370D		-0.114703698898542
P338D-L345D		-0.115530834296873
W336D-L350D		-0.115567183038066
N331D-R349D		-0.119622885098314
V346D-M375D		-0.121518310595452
R347D-E365D		-0.126600007921594
F364D-L373D		-0.129199836546743
L348D-L369D		-0.129647176715213
R349D-L355D		-0.129919641491269
L369D-E374D		-0.132891777934826
N331D-L348D		-0.134118586475918
G335D-V359D		-0.137318706065504
W336D-E374D		-0.137492725587849
F364D-Y372D		-0.138376990343322
L350D-Y372D		-0.140192916012228
P338D-L348D		-0.151828869103455
N331D-D376D		-0.153672763556621
L348D-L355D		-0.154058911943404
L345D-Y372D		-0.159333407001772
I337D-T356D		-0.165185292782121
P360D-E365D		-0.166473743134749
S358D-L373D		-0.173223601462388
Q332D-M375D		-0.175262972901079
G335D-G357D		-0.176600532397545
W336D-G351D		-0.182347114685173
W336D-L373D		-0.182696689666975
N331D-G351D		-0.183322934472489
L348D-E374D		-0.185401039602764
L345D-F364D		-0.191073636390628
L345D-L373D		-0.191229342059507
N331D-L355D		-0.194583159438287
V334D-T356D		-0.199872333407714
T356D-E374D		-0.200935748148876
P338D-T356D		-0.212305229713718
L348D-M375D		-0.212463431022208
P338D-V359D		-0.216424595228673
R349D-M375D		-0.221981011387212
N331D-W336D		-0.22526511305296
L333D-L355D		-0.229127756920954
G335D-T356D		-0.240144177441748
R347D-L370D		-0.24354188211553
W336D-L355D		-0.250211700840972
I337D-G357D		-0.250831636993319
W336D-T356D		-0.253575537286016
I337D-V359D		-0.265549020983178
L355D-D376D		-0.276648869158023
V334D-L350D		-0.286713808937743
P360D-E374D		-0.287797411778274
T356D-M375D		-0.296117142605168
L345D-T371D		-0.307287107771248
Q339D-F364D		-0.312670124015166
I337D-A363D		-0.329438303730146
L348D-T371D		-0.335266902480199
L355D-M375D		-0.340036752129179
I337D-S361D		-0.351409087771374
I337D-S358D		-0.353313655698846
W336D-P360D		-0.397480284606134
L350D-L355D		-0.398770893702373
S340D-A363D		-0.418352768536495
Q332D-L350D		-0.427199946485645
V346D-L373D		-0.451703039473046
R349D-E374D		-0.511908723645995