[Fri Aug 26 17:23:56 2016] >Input file: TMQ9LQ11S1D.pdb >TM segments: D411-441 MAIDEN score = 24.9126 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- H417D-L440D 10 E412D-I435D 10 I413D-I435D 1.96656520677948 L411D-I435D 1.24980220148892 I413D-F437D 1.21218495938463 I413D-L438D 1.18383500529692 D415D-L440D 0.984583620691392 L414D-I435D 0.653531747558025 L416D-D439D 0.643644719014689 L416D-S441D 0.573767353492417 L414D-L438D 0.570898583821062 D415D-F437D 0.553613616782509 L414D-L440D 0.536521757118861 E412D-F437D 0.502969182602396 R418D-L440D 0.446003697929065 L414D-F437D 0.423991319662812 L411D-L432D 0.362962081025243 L416D-L440D 0.35281026227631 I413D-Q436D 0.341461885199561 N428D-R434D 0.317380475002687 E412D-N428D 0.272670105027339 P427D-S433D 0.265495515044005 R418D-S441D 0.248708155539141 L414D-D439D 0.24653091073223 P426D-L432D 0.23357460184408 P426D-S441D 0.213364853138893 N424D-G430D 0.212902535352046 S422D-P427D 0.209405633535697 L414D-P426D 0.207918845050625 H417D-S422D 0.207833954386734 N428D-S433D 0.200288193661454 L411D-N428D 0.186917615706161 L414D-G430D 0.178370177777462 L414D-N419D 0.171122010436283 L414D-Q436D 0.141749516900295 L411D-Q436D 0.121679864197837 E412D-G430D 0.115108818450959 L429D-Q436D 0.1142292949643 D415D-D439D 0.112368129340335 L429D-L440D 0.112102249312662 L416D-S422D 0.110769320137316 G430D-L438D 0.110518330833456 G430D-Q436D 0.109409872590403 L411D-L416D 0.107483563362513 R420D-D439D 0.102068754602406 G430D-F437D 0.101690292179614 N419D-N424D 0.099518450359708 I425D-S441D 0.0972684824656804 L416D-N424D 0.0936352986726285 D415D-R434D 0.0883394616975934 N419D-D439D 0.0872632543946708 L416D-I421D 0.0814705947114285 L411D-P426D 0.0740048992194108 L429D-I435D 0.0671733216129744 I413D-D439D 0.0669213588123796 H417D-G423D 0.0635752315693834 H417D-I435D 0.0634525532430034 L416D-P426D 0.0538483971338657 S433D-L438D 0.0517914186974773 G423D-S441D 0.0495819190112703 S433D-D439D 0.0478105670760871 L414D-I421D 0.0448075279175999 E412D-D439D 0.0438386688086636 I425D-L432D 0.0430807740682844 R434D-D439D 0.0428736002817613 L414D-S433D 0.0427193847164491 S431D-Q436D 0.0314609682077978 N424D-S441D 0.0292690316215598 S422D-L440D 0.0267251835166983 D415D-L429D 0.0232084648941735 L411D-G430D 0.0231859960543908 N419D-L440D 0.0217135881548134 N428D-I435D 0.0214817179985491 L429D-D439D 0.0123752796226915 H417D-I425D 0.0114444738425739 L416D-G423D 0.00926947197724459 G423D-L440D 0.00695889373369818 L432D-L440D 0.00462467889887463 L416D-L429D 0.00300368009368057 L432D-L438D -0.00331973676013364 I421D-P426D -0.00374335343780396 I413D-G430D -0.00446702488303252 I413D-R434D -0.00501778781369167 L414D-N428D -0.00935666673955637 G430D-D439D -0.0142813703949387 G423D-N428D -0.0153424392697081 L411D-S431D -0.0155199398996331 P426D-D439D -0.0199142094713674 L429D-S441D -0.0216971662207843 I425D-I435D -0.0270847588366703 L416D-I435D -0.027743675410469 G423D-L429D -0.0289478287302951 S431D-F437D -0.0305268544079074 E412D-L432D -0.0339072734376229 R420D-I425D -0.0339348205268326 I425D-S431D -0.0376729385777934 G430D-L440D -0.0390880188203138 I435D-S441D -0.0396371753928202 D415D-Q436D -0.0414825132561125 P426D-L438D -0.0427009300306493 D415D-I425D -0.0460266867508818 D415D-R420D -0.046585495675604 S422D-S441D -0.0494234857617619 D415D-S441D -0.0500491663814752 D415D-I435D -0.0524269487180855 N424D-L440D -0.0564201301126723 D415D-P426D -0.056540950116185 I413D-L429D -0.0593669256866542 L414D-S431D -0.0596560270453165 P427D-L440D -0.0628173797481533 S431D-L438D -0.0629960661304541 E412D-L440D -0.0659398205445862 I425D-D439D -0.069481269105407 E412D-L438D -0.0714255998457247 R420D-S441D -0.0753754249135128 I413D-S433D -0.0783415161265868 P427D-L438D -0.0788698138495203 I413D-S431D -0.0796903839954816 N428D-L440D -0.0828884720522316 I435D-L440D -0.0839351571419229 L411D-D439D -0.0867934895287068 E412D-L429D -0.0889648870000768 E412D-S431D -0.0892355954937698 N424D-L429D -0.0894581768726765 L416D-Q436D -0.0933483121683807 E412D-S433D -0.0941620411365172 L429D-F437D -0.094859805920569 R418D-G423D -0.0964076947423429 I413D-S441D -0.0978451889182335 P426D-I435D -0.098141011746383 L411D-R434D -0.100669338541719 L416D-F437D -0.100861785849911 I421D-D439D -0.102336112556089 L414D-L432D -0.104190200591036 P427D-R434D -0.107631806814509 L432D-D439D -0.111150543794899 P426D-L440D -0.112592694086749 I425D-L438D -0.117392464414083 N419D-S441D -0.119708427673253 P427D-I435D -0.119950341065725 L414D-P427D -0.121642237901783 L416D-I425D -0.133007619247037 N419D-I425D -0.13440462319324 H417D-F437D -0.139086779935483 R418D-L438D -0.139448005222334 D415D-L438D -0.140808756375641 R418D-D439D -0.145738599513376 L414D-I425D -0.151923571314387 L432D-F437D -0.154849008849174 D415D-I421D -0.157577347403784 L411D-L440D -0.158034414507097 P426D-S433D -0.171905612913956 N419D-L438D -0.17313848894144 L414D-S441D -0.174129319219229 I425D-L440D -0.179608697467087 D415D-L432D -0.179820463221555 R420D-L440D -0.189284951220247 N428D-L438D -0.191309266388473 E412D-R434D -0.197243819253862 I421D-L440D -0.20623509522318 L416D-L438D -0.20698149766843 L411D-S433D -0.208735652371116 L414D-R434D -0.215778808955276 H417D-N424D -0.216388296860913 L411D-L429D -0.233666196198802 L411D-L438D -0.239668692774236 I413D-L432D -0.245323213296038 L429D-L438D -0.255202449177933 I425D-G430D -0.264986666285449 L411D-F437D -0.272873655556602 G430D-I435D -0.274179070610255 L429D-R434D -0.284715503027446 P426D-S431D -0.301781493272827 L414D-L429D -0.345683737142311 I421D-S441D -0.348837203762407 I413D-L440D -0.362480851014696 H417D-L438D -0.384711929729954 E412D-Q436D -0.40563127772362 H417D-D439D -0.548682029462034 P427D-L432D -0.567128768416684 H417D-S441D -0.673971166865037