[Fri Aug 26 17:24:26 2016] >Input file: TMQ9LQ11S4D.pdb >TM segments: D303-336 MAIDEN score = 5.4838 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- K313D-M336D 1.09600602874875 K313D-K335D 0.931963813855447 T310D-M333D 0.882069352477521 V305D-N326D 0.706943313128409 C312D-K335D 0.581318165002583 S307D-G332D 0.551765894625009 V305D-L325D 0.525770206171593 K316D-M336D 0.5177097574534 V305D-S328D 0.467229638928623 G303D-R324D 0.451413393118739 S314D-M336D 0.434074248733227 V305D-G327D 0.427694603155534 I309D-M336D 0.39985834552152 I309D-M333D 0.3784424261104 G311D-K335D 0.375352135105241 V305D-V329D 0.347712976121523 C312D-M333D 0.337266824351634 C312D-G334D 0.336558416440726 P330D-K335D 0.332277042870246 S307D-V331D 0.323096828699851 I309D-G332D 0.321649689668572 T310D-G334D 0.309654949205427 N304D-P330D 0.300615174905565 L315D-M336D 0.282427295906396 V305D-C312D 0.271983483369905 C312D-V331D 0.263168545223236 V305D-D319D 0.260796753435881 T310D-L318D 0.241827794320812 P306D-C312D 0.232274195879151 L318D-P330D 0.228019771452463 D319D-V329D 0.222644943045485 L320D-L325D 0.216876605747077 G311D-V331D 0.213895629515054 D319D-M336D 0.199759307488258 L320D-M333D 0.195309368326726 V305D-P330D 0.186030205690939 I309D-K335D 0.184552774245797 K313D-L318D 0.183285611520682 G308D-L315D 0.179704551126092 L315D-G334D 0.175715358924528 V305D-M336D 0.170109877188752 L315D-G332D 0.163968394663248 G303D-L320D 0.159943951578336 T310D-L315D 0.159862430964564 G308D-G334D 0.158813934730124 N323D-S328D 0.155740323749061 G308D-M336D 0.147368461117859 C312D-L318D 0.138815147639149 N304D-I309D 0.137591982620018 C312D-L317D 0.1367866239901 N304D-M333D 0.136543192212128 D319D-N326D 0.135220084620219 N304D-D319D 0.131512244767038 I309D-K316D 0.129783922694734 T310D-M336D 0.127934096741728 V329D-K335D 0.127140920100764 N304D-T310D 0.124554008037581 G308D-K313D 0.119695090827812 G308D-V329D 0.119371650046396 S307D-P330D 0.117935686169126 N304D-S328D 0.117594253037616 S307D-M333D 0.117427385065636 L315D-L320D 0.117289385178318 V305D-G311D 0.114191248367817 L318D-G334D 0.112199663571516 V305D-L320D 0.103920722246748 S307D-G334D 0.103816654067716 G308D-G332D 0.103170728291181 L318D-L325D 0.101907326700688 V329D-M336D 0.0954070208313738 I309D-V329D 0.0940571562193391 P306D-L320D 0.0922585082646084 I309D-L325D 0.0858893702086523 L320D-G327D 0.0853934954070272 K316D-G334D 0.084960092531349 L318D-N323D 0.0847009683504822 V305D-G334D 0.0835187629299656 T310D-P330D 0.0832035603194825 N304D-E321D 0.0831229057117766 L325D-P330D 0.0816138920108429 S307D-K313D 0.0797312437259849 T310D-V331D 0.0786713685755411 G303D-G308D 0.0747511551278567 G308D-S314D 0.0746633361131677 K313D-G332D 0.0731099351316029 G327D-G332D 0.0727774947936045 N304D-L325D 0.0718340162207971 T310D-L317D 0.069743813126667 T310D-V329D 0.0691689934544631 T310D-S328D 0.0691126202739962 P306D-L325D 0.06604449314238 G308D-G327D 0.064108403669449 S314D-D319D 0.0628725643157071 S307D-C312D 0.05978289631779 G303D-E321D 0.0565957329635394 S314D-G334D 0.055892457545762 G311D-V329D 0.0511023121938882 P306D-G311D 0.0488564601820631 V305D-N323D 0.0467523280142259 S307D-V329D 0.0453334809676003 E321D-N326D 0.0427867605030672 I309D-S314D 0.0411395507113177 G308D-S328D 0.04071982411356 P306D-M336D 0.0405239287130479 S307D-N326D 0.0374943905262439 G308D-L318D 0.0359498033371812 G308D-V331D 0.0320996977686772 N304D-V331D 0.0320415671409888 N304D-S322D 0.0297703686551052 V305D-E321D 0.0286393696559553 S314D-G332D 0.0274853395134551 V305D-L315D 0.0272625881620236 S314D-M333D 0.0226047047028655 G311D-K316D 0.0185194987964654 S307D-K335D 0.0175125998733749 L318D-K335D 0.0172265579315365 L318D-V329D 0.0165014275017903 V305D-G332D 0.0164004806895885 P306D-G334D 0.0160942455832669 N304D-N323D 0.0113885320485685 L318D-G332D 0.0109201902192346 L318D-V331D 0.00907822852723061 I309D-L315D 0.00776732033068095 K313D-G334D 0.00770117913247681 G311D-P330D 0.00492281441167819 L317D-K335D 0.00182292420661057 L317D-M333D -0.000381937082275741 G303D-L325D -0.00331358645223112 G311D-L318D -0.00579757559904781 L317D-G334D -0.00698621637494234 P306D-V329D -0.00716847837090917 P306D-K313D -0.0111938689799977 P330D-M336D -0.0134767896153742 P306D-D319D -0.0153362406851039 G303D-S322D -0.0158912785161767 S328D-G334D -0.0159153670903114 V305D-L318D -0.0163668937161496 E321D-S328D -0.0166514395256143 T310D-G332D -0.0192276792709012 I309D-L320D -0.0205510697571212 E321D-G327D -0.0211919822401958 T310D-D319D -0.0218394711667798 T310D-K335D -0.0320292116040388 D319D-P330D -0.0340789224564741 S307D-S328D -0.0373457780746893 G303D-N323D -0.0409097401078573 D319D-L325D -0.041300010082211 E321D-V329D -0.0417726452731566 P306D-R324D -0.0428772916465627 G303D-P330D -0.0485589658996055 I309D-D319D -0.0494152795636009 G308D-P330D -0.0510594188991507 L320D-S328D -0.0596180480510538 S307D-L318D -0.0596357962209708 S328D-M333D -0.0603727736645401 S314D-K335D -0.0611349151494165 I309D-S328D -0.0638224116803912 T310D-K316D -0.0660500204202523 N304D-L320D -0.0713473998743255 G308D-K335D -0.0732197717245056 V305D-K335D -0.0759833539469694 V305D-L317D -0.0765722192665743 K313D-M333D -0.077367124739069 S307D-L315D -0.0793196035393144 L320D-P330D -0.0808995611137675 N304D-L318D -0.0867733932242891 I309D-L317D -0.0967616872847901 N326D-V331D -0.0999425066905554 I309D-P330D -0.100360127235323 S307D-L325D -0.101153121733892 V305D-R324D -0.10125239011866 D319D-R324D -0.101787624061263 G303D-S328D -0.10396952565678 G311D-L317D -0.104331897782459 G303D-I309D -0.106183288741915 N323D-V329D -0.107537184392972 V305D-S322D -0.107969317102016 S307D-L320D -0.10825059240431 P306D-L318D -0.110617298124724 I309D-G327D -0.110698296476871 P306D-L315D -0.1114018803685 N304D-V329D -0.111633021138736 G327D-M333D -0.128531089194734 L320D-N326D -0.130323077022861 V329D-G334D -0.130413983094926 G311D-G332D -0.133183825743034 P306D-M333D -0.136523483031975 K316D-G332D -0.146173824301385 S307D-M336D -0.147021644788532 D319D-M333D -0.151935141237634 C312D-M336D -0.152828297459138 S307D-G327D -0.152992061020462 P306D-G327D -0.156689331734175 G303D-V329D -0.163024158972764 G311D-G334D -0.170333839977869 K316D-M333D -0.170881127413707 P306D-N323D -0.172272303886351 K316D-K335D -0.174304780039705 P306D-K335D -0.179584650967324 I309D-G334D -0.190115373291193 C312D-D319D -0.195640012885872 R324D-V329D -0.197522522561846 K313D-V331D -0.208776239784512 L315D-K335D -0.212313910930785 N304D-G332D -0.21409498262557 P306D-V331D -0.218928631347375 L320D-V329D -0.219877444187916 P306D-G332D -0.227033822436347 G303D-G327D -0.240574837494138 V331D-M336D -0.244376513971444 G311D-M336D -0.24974390285966 G308D-M333D -0.259460445451173 N304D-R324D -0.265864244712169 C312D-P330D -0.267267634131686 V305D-V331D -0.26727348278645 V305D-T310D -0.268261642990255 L318D-M336D -0.280554887602651 C312D-G332D -0.293236857947678 G311D-M333D -0.324863710923186 P306D-S328D -0.333959415705989 P306D-N326D -0.334463090610781 V305D-M333D -0.354308400056782 I309D-L318D -0.369078266027049 L318D-M333D -0.381473750847169 L315D-M333D -0.387144090226542 L317D-M336D -0.421344165961766 N304D-G327D -0.449467383053317 I309D-V331D -0.466892095260438 P306D-P330D -0.517837856184318 G303D-N326D -0.582849857525424 N304D-N326D -0.872301410068046