[Mon Aug 29 17:33:32 2016] >Input file: TMQ9NRR2S3G.pdb >TM segments: A137-147_A158-171_A179-185 MAIDEN score = 4.7443 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L137A-L142A 1.26129238581377 W164A-L179A 1.03393224327473 W160A-V184A 0.926896140579315 R158A-V184A 0.885518553682555 W160A-V182A 0.730658805377368 V161A-V182A 0.664841418003517 T162A-V182A 0.578618477743248 R158A-S185A 0.563491136922476 C159A-V184A 0.538815530674482 L137A-P143A 0.500811137613185 V161A-R180A 0.417468500735789 T162A-L179A 0.417398905903879 V161A-V184A 0.348922722920827 C159A-S185A 0.321806730247362 V161A-K183A 0.280895016172155 G163A-E181A 0.255561181095606 T167A-L179A 0.23142969139228 V161A-Y166A 0.203776400778377 V144A-C159A 0.200428089759519 C159A-R180A 0.183387581113706 V144A-V161A 0.16598679249215 G165A-R180A 0.155868811591525 L137A-C145A 0.155250750771414 S139A-V144A 0.131047240205501 Y166A-E181A 0.130267896376282 G163A-R168A 0.129868954922985 L137A-V144A 0.121502673709323 Y166A-V182A 0.119440998480187 W164A-E181A 0.116623503247805 G163A-V184A 0.112825945409939 W160A-E181A 0.103869133608976 Y166A-L179A 0.0947654848658341 S139A-C145A 0.0924688407296748 G163A-K183A 0.0850166646415885 S138A-C145A 0.0819041085136594 T162A-S185A 0.0801689233180184 T167A-E181A 0.0737313016071655 T167A-K183A 0.0656593697750347 C145A-V161A 0.061362028862098 W164A-E169A 0.036976515802289 S138A-V144A 0.0359548928689453 R168A-V182A 0.0308829014409226 L146A-W160A 0.0256713330852151 V144A-T162A 0.0176015637772751 L146A-C159A 0.016837259365369 R158A-E181A 0.00195766871829317 V161A-T167A -0.00109531469536428 G163A-E171A -0.0127207636133853 P147A-W160A -0.0175620483352317 W160A-R180A -0.0180188549758005 V161A-E181A -0.0278340762635993 C159A-K183A -0.0341638343838739 W164A-V182A -0.0379709012824772 G163A-E169A -0.0388415695188735 R168A-L179A -0.0492035642011835 G165A-V182A -0.0497514346602417 T162A-R168A -0.0502220778320751 E171A-R180A -0.0517555748456622 P143A-T162A -0.0641043020859595 R168A-R180A -0.071880898139346 G163A-L179A -0.0764991158753423 G163A-V182A -0.0781278087829462 W160A-L179A -0.0790387665203696 W160A-K183A -0.0827994286423219 V144A-W160A -0.0879140808088452 I141A-L179A -0.0955135642346341 P147A-R158A -0.09698873406913 Y166A-R180A -0.0998326348296915 W160A-S185A -0.102973372656067 T162A-K183A -0.114793773101002 C145A-C159A -0.115404062723888 T162A-T167A -0.118438828169774 S138A-P143A -0.132250672985441 G165A-K183A -0.134219435657169 T167A-V184A -0.135021808360072 R168A-E181A -0.141660872612973 R140A-L179A -0.141715247009516 W160A-G165A -0.148051237101477 G163A-R180A -0.150797648251368 G165A-G170A -0.150804425232484 W164A-G170A -0.156364245524024 T167A-R180A -0.157866368371311 R158A-V182A -0.161681660597505 T167A-V182A -0.178910690132843 W164A-E171A -0.185355746280258 R158A-K183A -0.186374880926998 C159A-V182A -0.192661484212861 T162A-V184A -0.201404797421926 G165A-E181A -0.206588491983833 V161A-R168A -0.210790484051055 G165A-L179A -0.224072223078794 T162A-E181A -0.230208862239523 C145A-W160A -0.240610448966066 V161A-L179A -0.256781764261863 V161A-S185A -0.263130087837898 G165A-E171A -0.277423239218262 P147A-C159A -0.277729378156522 W164A-R180A -0.322543839144601 C159A-E181A -0.391261509927512 Y166A-E171A -0.425220746723322 T162A-R180A -0.490198286182445