[Mon Aug 29 17:40:47 2016] >Input file: TMQ9P0N5M1G.pdb >TM segments: 32-49_ 64-82 MAIDEN score = 5.6380 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- K45 -V71 10 F42 -I72 1.06493138004857 K45 -L67 0.969368280730871 I41 -V71 0.946263184441527 E38 -L74 0.94187952067463 K45 -I72 0.745274984615824 F42 -F75 0.714203906294695 L49 -L65 0.684917059547351 F42 -V71 0.63749623672873 G46 -I72 0.581596976520757 E38 -F75 0.564757629350573 F35 -T78 0.56336036897764 I41 -R73 0.558805800561345 L39 -F75 0.53779435027083 V47 -G68 0.536315753973971 L49 -Y66 0.523648231920488 L49 -I69 0.478953215257056 L43 -I72 0.454309337931829 F42 -R73 0.440191397171461 G46 -V71 0.430359656106139 Y44 -V71 0.429625071172801 F42 -L74 0.426035193151509 Y44 -I72 0.410037554457166 I41 -I72 0.392091376977144 F35 -N81 0.352766893245339 E38 -G80 0.342112911867355 L48 -L67 0.316895707446873 L48 -V71 0.315276753296943 L65 -E70 0.314165211566622 L49 -L67 0.301429774198457 L43 -V71 0.300259742322126 L36 -G77 0.282936419585834 L39 -T78 0.271654371731165 F42 -Y66 0.223290636928662 L49 -V71 0.209671745959996 I41 -L74 0.196201912155766 L37 -K45 0.182264006598022 E38 -R73 0.181459784107011 T33 -F40 0.18082591574971 Y34 -K79 0.180085730888262 T33 -G77 0.176952894173612 R73 -K79 0.173857078280531 K45 -G68 0.155694921091665 E38 -E70 0.14995999415209 I41 -G77 0.148077581313006 Y44 -Y66 0.145434332248815 F40 -F76 0.139708172893316 F40 -T78 0.137707319675177 R73 -G80 0.134820866190049 L36 -L82 0.134030729392212 G46 -I69 0.132345452403821 I72 -K79 0.128453144506668 L48 -L74 0.127814725784833 Y44 -L65 0.125750591490807 G46 -F75 0.12537849690402 A32 -G77 0.115869092086392 L67 -L74 0.114564987992147 I41 -I69 0.113407061931685 E38 -F76 0.113070813936443 L48 -E70 0.112794884163743 F35 -F76 0.112261833047953 L48 -L64 0.111870997307094 V47 -L65 0.108591157030325 A32 -G80 0.107076360716156 E70 -G77 0.106319838773495 T33 -I41 0.105568974058403 G68 -R73 0.105109924984934 V71 -G77 0.104031088581214 F42 -K79 0.0992399265911565 E38 -K79 0.0979768302606994 L43 -L67 0.095506928828152 L67 -R73 0.0947971696933969 L39 -I69 0.0878307669232825 F40 -G68 0.0867496987055238 L48 -F75 0.0843047164123596 L49 -E70 0.0784608617487526 L48 -I72 0.0668308586365679 G46 -L74 0.0665245025381425 L49 -I72 0.0663760440572804 F40 -K79 0.0658272426408368 Y44 -T78 0.0599860654096458 A32 -F40 0.0596332010342313 E38 -G46 0.0582985295519387 L39 -Y44 0.0575825487437482 Y44 -L74 0.0575456622551966 E38 -G77 0.0562836860600122 K45 -L74 0.0536339478142449 L36 -G80 0.0467212007825104 T33 -F75 0.0447279150607862 L64 -I72 0.0446539552389336 A32 -L39 0.0435505730626162 F40 -R73 0.0431328588326259 G68 -F75 0.0425879775151223 K45 -T78 0.0410306960830661 L74 -K79 0.0395226485587274 Y66 -R73 0.0391572271462142 V47 -Y66 0.0383282186100864 L49 -L64 0.0379108568526654 Y34 -F76 0.0372195096044194 T33 -F42 0.0364459945457689 L39 -L74 0.0364357551385384 Y66 -L74 0.0331390908348057 A32 -T78 0.0326547247346207 F40 -N81 0.0323484432103536 Y34 -N81 0.0316818200429723 L37 -R73 0.0290847150119102 L43 -T78 0.0279461090504771 A32 -L82 0.0271209697778341 L39 -F76 0.0266203879283347 F76 -L82 0.0262320148524589 T33 -E38 0.0262154163956343 L36 -L74 0.0252159448764404 Y34 -T78 0.0245656422710415 V47 -R73 0.0193148546799984 L36 -K79 0.0191174555120126 F42 -E70 0.0183464623209497 E38 -L82 0.0172320933975314 V47 -E70 0.0161987146016063 T33 -L82 0.016139199468665 L36 -F76 0.0129076140459912 L43 -L65 0.00843781858091397 L39 -I72 0.00583737156465514 R73 -N81 0.00571242126179694 F35 -L43 0.0055325939537143 L74 -L82 0.00462467889887463 E70 -F75 0.00234136112707972 L39 -G80 -0.000706496892354913 L43 -F76 -0.00201749479417046 L39 -G68 -0.00211132847157458 Y44 -L67 -0.0038876541442967 G46 -L64 -0.00391643544828568 G46 -G68 -0.00487090577067129 Y44 -R73 -0.0078205159889384 F40 -E70 -0.0091261047714255 F42 -L48 -0.00981598386350324 V47 -L64 -0.0129158056128977 F35 -I72 -0.0139676716800921 T33 -G80 -0.0144591897914679 L39 -R73 -0.0145592517497422 L48 -G68 -0.0148310507004208 F35 -F75 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-0.104659470441294 I69 -G77 -0.106611879212685 I41 -F76 -0.106796087897759 F35 -G80 -0.107275726115786 E38 -L43 -0.108997047003947 I41 -L67 -0.111551943100722 F35 -L82 -0.112366053796453 Y66 -I72 -0.113027606684165 L48 -Y66 -0.113221375004568 V47 -L67 -0.115774452559775 I41 -L49 -0.116633804000439 F42 -L65 -0.118764728310395 K45 -G77 -0.121692736373962 F42 -L67 -0.123041741367475 F40 -I69 -0.126528023448931 G46 -Y66 -0.126736033186567 F35 -F42 -0.127093604145521 I41 -N81 -0.128977571901932 G46 -L65 -0.132209774787929 K45 -R73 -0.133824340753975 L43 -I69 -0.135195476694063 E38 -I69 -0.1357244215452 L39 -L48 -0.140667427443212 A32 -K79 -0.141264989949735 F35 -V71 -0.141625805265611 L39 -G46 -0.142475386800229 F35 -R73 -0.144235239521201 Y34 -G77 -0.145247916285195 L48 -R73 -0.145981135541702 L37 -K79 -0.147194308357653 L37 -V71 -0.147283750021489 Y34 -L39 -0.149225843883137 I41 -T78 -0.151871475982993 Y44 -I69 -0.156103939202745 E38 -V47 -0.156941416013133 K45 -Y66 -0.157705817224628 L48 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F35 -K79 -0.19742449650933 K45 -F75 -0.198663778428649 V47 -I69 -0.200187767549757 F42 -N81 -0.202523036661574 G46 -R73 -0.205277216947656 E70 -T78 -0.210704793431176 E38 -N81 -0.215628872507888 I72 -T78 -0.215880725342276 L36 -T78 -0.220147585391254 A32 -N81 -0.224842183912471 F35 -I41 -0.227063918046993 I41 -G46 -0.230497825200961 Y34 -I41 -0.23803646233236 V47 -V71 -0.246071733030607 I72 -G77 -0.246117946240311 F40 -F75 -0.259042092667231 F42 -F76 -0.265218722021737 L48 -L65 -0.266887957341751 F35 -G77 -0.267282788617128 F40 -I72 -0.269122216742058 I69 -F75 -0.270457135411606 I41 -G68 -0.279380775211759 T33 -L39 -0.282888079820427 L67 -I72 -0.287631930117135 L37 -T78 -0.292949722840456 G46 -L67 -0.295299588404676 L39 -G77 -0.296306068610289 A32 -E38 -0.297998466770683 I41 -F75 -0.308739010711196 I41 -L48 -0.318053438214493 F42 -V47 -0.331120174243555 L37 -F42 -0.364533656098294 F40 -V71 -0.365611078485713 L37 -L43 -0.373521165820437 I69 -L74 -0.382951160127174 L43 -L48 -0.386211614601386 L36 -I41 -0.394085448998963 F42 -T78 -0.395736457963823 F35 -F40 -0.419653517286223 L43 -L49 -0.441992650505485 I41 -V47 -0.460805595908269 V47 -I72 -0.460962368649373 T33 -T78 -0.495494334743793