[Fri Aug 26 17:43:11 2016] >Input file: TMQ9P273S2D.pdb >TM segments: L728-746 MAIDEN score = 17.0419 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- W733L-C738L 10 W733L-E741L 4.12538254612087 C729L-C738L 1.21609027245618 E728L-C738L 1.12257361161626 W733L-I740L 1.05991799007329 N734L-I740L 0.774563552004964 Q731L-P744L 0.496075907113524 G732L-P744L 0.374639076205052 E728L-T739L 0.344939642102345 S730L-H737L 0.31770006937341 G732L-H737L 0.311052995975262 S730L-G735L 0.296941030858118 N734L-G742L 0.283970613245307 W733L-T739L 0.234159908802549 W733L-C743L 0.202890824893275 S730L-G742L 0.197299481546034 C729L-G742L 0.171732700742261 E728L-I740L 0.14638097882456 Q731L-H737L 0.129165768638455 S730L-I740L 0.0923327962078084 E728L-W733L 0.0822323215974969 S730L-C738L 0.0766213047339486 S730L-G745L 0.071048027289387 S730L-T739L 0.0684529362140802 E728L-E741L 0.0652838416906089 N734L-G745L 0.0618731683049958 G735L-C743L 0.0573320173827732 H737L-G742L 0.0547508755137218 Q731L-L746L 0.0276190542748225 S730L-C743L 0.0249991930969893 Q731L-C738L 0.0242851217885169 E736L-G742L 0.0228741153558905 E728L-H737L 0.0158164158477894 W733L-P744L 0.0112642515691297 G732L-C743L -0.00296699263796674 Q731L-T739L -0.00332653537231486 E741L-L746L -0.00659804232023598 G732L-G745L -0.00979015631574764 G732L-E741L -0.0156303270325848 C738L-P744L -0.0191087109138746 E736L-E741L -0.0196310397090178 G732L-G742L -0.0243310416191187 C729L-E736L -0.0270304006451649 Q731L-E736L -0.029838951310513 W733L-G745L -0.0405083591577435 C729L-C743L -0.0652780355334963 G735L-I740L -0.0671297809630129 S730L-E741L -0.0672117159617529 G735L-P744L -0.0734211893012304 C729L-H737L -0.0737661627797466 E728L-G742L -0.0788730330237292 C738L-C743L -0.0859455282048485 G732L-L746L -0.0900295536104956 Q731L-G742L -0.100673118520101 E728L-E736L -0.103387602069628 Q731L-G745L -0.104251729817086 S730L-E736L -0.105635445377666 G735L-G742L -0.110860332950776 G732L-T739L -0.113171678357385 G732L-I740L -0.117508846317842 W733L-G742L -0.12155994208551 E728L-G735L -0.1270262481249 E728L-N734L -0.13742992137811 N734L-E741L -0.13886682523427 N734L-T739L -0.139224320607836 N734L-P744L -0.141620500360914 W733L-L746L -0.145537324467166 Q731L-I740L -0.150471772372542 N734L-C743L -0.155058005817404 C729L-G735L -0.16330174632405 S730L-P744L -0.163904787480723 Q731L-E741L -0.174098341294151 G735L-E741L -0.237364999975237 Q731L-C743L -0.238780841142701 G732L-C738L -0.255105753667791 C729L-I740L -0.256358489473748 C729L-N734L -0.262619432608226 C729L-P744L -0.271318184983689 C729L-T739L -0.300940682359302 C729L-E741L -0.383838990843162