[Mon Aug 29 17:43:01 2016]
>Input file: TMQ9P273S5G.pdb
>TM segments: A544-573

MAIDEN score = 27.4145

Below is the ranking list of the residue pairs and their related pseudo-energy
(the lower, the better). This includes inter-chain residue pairs.

The maximum (least favorable) pairwise energy value has been set to 10.
See the MAIDEN software article:
Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161.


-----------		----------------
Calpha pair		Empirical energy
-----------		----------------
Y559A-C564A		10
C564A-T573A		10
C553A-Y559A		2.03874906637473
C553A-C564A		1.33737513882619
C549A-R563A		1.17880534375546
A548A-K561A		1.02950368648031
S560A-L565A		0.989182829608064
Q558A-L565A		0.944920124479446
P550A-R563A		0.775446000577174
C549A-C564A		0.636359100124253
Y559A-C566A		0.629090116270755
G555A-F567A		0.619992697565057
Q558A-C566A		0.514977939493616
V551A-R563A		0.492180394553779
Q558A-K571A		0.412006734721799
C544A-C549A		0.392782294580551
C553A-L565A		0.382928835223504
L552A-C564A		0.364588624710182
P550A-K561A		0.354369816439225
L552A-R563A		0.322823268765837
C553A-R563A		0.269872125047341
G562A-G572A		0.264947770625442
A547A-R563A		0.257728400015291
N556A-F567A		0.257619088502217
N556A-S568A		0.243716413582867
Q558A-C564A		0.238754490848121
Q558A-G569A		0.229649528514113
N556A-G569A		0.227322493189283
S560A-S568A		0.215780580097929
Q558A-G572A		0.212661477623736
Y559A-L565A		0.21156388441207
R546A-R563A		0.210050073330663
L565A-T573A		0.194970549737986
S560A-G572A		0.194090911304449
C549A-L565A		0.190406341229005
A548A-G562A		0.188388260017771
A548A-T573A		0.187318977396801
V551A-S560A		0.179841072250351
L565A-K571A		0.17978209396463
Y559A-K571A		0.179464372239497
L552A-C566A		0.178202979589523
Y559A-S568A		0.177738829978273
G555A-W570A		0.161387462049558
P550A-T573A		0.151953094613718
V551A-C566A		0.149003097627576
G557A-L565A		0.147688282846783
C544A-V551A		0.141937156529984
C553A-S568A		0.134232022134641
R546A-G562A		0.133526290160717
C549A-S560A		0.131133822582963
C549A-Q558A		0.131053014259025
G555A-C564A		0.12557332437648
S560A-K571A		0.121972138870543
A547A-S554A		0.114402537263848
G557A-F567A		0.104567081025447
R563A-K571A		0.100665780814022
C549A-S554A		0.0935837136037745
G555A-G572A		0.0885993142582311
S554A-R563A		0.0856976900470885
V551A-G557A		0.0838755042810224
L552A-G572A		0.0823271749243304
R546A-V551A		0.0807671105711818
G557A-G572A		0.0791939191122273
S554A-G569A		0.0669993992145423
G557A-C566A		0.0656358290533454
S554A-S560A		0.0604980812149544
A547A-Y559A		0.0535313469415049
A548A-C553A		0.0524827655933082
C564A-K571A		0.0520686572862692
S554A-G562A		0.0514475247318922
S545A-L552A		0.0450748475276506
S560A-T573A		0.0443258434347849
A547A-C553A		0.0441097839660469
G557A-G562A		0.0425303465384754
G555A-S560A		0.0423857020437228
Y559A-G572A		0.0381990975219111
A548A-L565A		0.0371257113276879
S560A-C566A		0.0350325968522629
C549A-C566A		0.0339509758819636
S545A-V551A		0.0338370209154633
A547A-T573A		0.0326916811060012
A547A-S560A		0.0323743042430404
K561A-F567A		0.029689339939857
V551A-K561A		0.0239663252256653
Q558A-W570A		0.0211076577242475
S554A-K561A		0.0188107554760544
G555A-T573A		0.0181196210142203
R546A-L552A		0.0171752859962631
A547A-L552A		0.0157530810135214
C549A-G572A		0.0136341087791187
A548A-R563A		0.0129494912193571
V551A-L565A		0.00929862641685908
V551A-Q558A		0.00669254640500938
R546A-C553A		0.00367617626067862
Q558A-F567A		0.0028712441868588
G557A-R563A		-0.000234092219676185
C553A-T573A		-0.00198044384231189
N556A-C566A		-0.00697319607135621
L552A-Q558A		-0.0081457140673058
G555A-K571A		-0.00984137483664349
C564A-G569A		-0.0116966397023042
A547A-C564A		-0.0123300707689085
V551A-Y559A		-0.0130782487248364
S554A-C566A		-0.0134883168406343
C549A-Y559A		-0.0154739212833088
L552A-Y559A		-0.0169643682519292
G557A-K571A		-0.0177281838443444
V551A-N556A		-0.0180269977370915
L565A-W570A		-0.0196764157309524
C549A-G562A		-0.0200007671812727
L552A-L565A		-0.0208856323565318
N556A-T573A		-0.025323893131544
L552A-T573A		-0.0263531040391936
V551A-K571A		-0.0269734937429433
Q558A-T573A		-0.0283143840496206
R546A-K561A		-0.0312188015178476
S568A-T573A		-0.031740940459918
N556A-R563A		-0.0359530725693737
A548A-Q558A		-0.0385007065914094
K561A-G572A		-0.0386693104772742
R563A-G572A		-0.0413498996762109
N556A-W570A		-0.0413842460263926
L552A-G557A		-0.041584415067808
P550A-C564A		-0.0521930933130484
A548A-C564A		-0.054141322723233
P550A-G572A		-0.0542267731573496
S554A-K571A		-0.0549342622909358
A548A-S554A		-0.0551853469736603
C549A-N556A		-0.057279910632305
Q558A-S568A		-0.0575936009360367
Y559A-T573A		-0.0626811579438153
S554A-S568A		-0.0640986568278368
L565A-G572A		-0.0656170613279139
L552A-F567A		-0.0734255392172471
S554A-F567A		-0.0751978887906857
C553A-S560A		-0.0811384770593087
G562A-T573A		-0.0816332165757219
C549A-K561A		-0.0840673467443165
Y559A-W570A		-0.0848898072097886
V551A-C564A		-0.0853825647912121
P550A-G562A		-0.0860751833335571
C553A-G562A		-0.0864216870323968
V551A-G572A		-0.0878963662920134
C566A-K571A		-0.0938575823933969
P550A-L565A		-0.094119225659905
G555A-R563A		-0.0962926959263051
C553A-C566A		-0.106665030042741
G555A-C566A		-0.10705094899533
C566A-G572A		-0.107813675490561
L552A-K571A		-0.109693391121582
G557A-C564A		-0.11077818481685
S554A-W570A		-0.117734237436732
A548A-S560A		-0.118505614250484
G555A-L565A		-0.119056407379065
R563A-W570A		-0.119978247577335
P550A-Y559A		-0.120292040374627
S554A-T573A		-0.120830649848327
C553A-W570A		-0.120893190073621
G555A-G569A		-0.121642028318511
G555A-S568A		-0.122490404520452
S560A-W570A		-0.122688736908144
S554A-Y559A		-0.125314794464188
C564A-G572A		-0.127986137374477
C566A-T573A		-0.129337379643955
N556A-G572A		-0.1315879589198
Q558A-R563A		-0.134182646100212
G557A-G569A		-0.141170625329417
C544A-L552A		-0.143665781015935
N556A-C564A		-0.143780381279932
Y559A-F567A		-0.146453950504124
S554A-C564A		-0.14859606451514
G562A-K571A		-0.150584365979987
S554A-G572A		-0.152789067458645
G557A-W570A		-0.157537756891406
F567A-G572A		-0.16374292790547
V551A-T573A		-0.163961651649443
C549A-G557A		-0.164707705532333
L552A-W570A		-0.169486322402221
S560A-F567A		-0.177695101707996
A548A-Y559A		-0.178970095790465
V551A-G562A		-0.180126294223641
K561A-T573A		-0.184532636828857
G557A-T573A		-0.188622014329817
L552A-S560A		-0.190766568397916
S545A-P550A		-0.199156967720267
L552A-G562A		-0.200277767253937
L552A-K561A		-0.204231086518582
A547A-G562A		-0.220069331041352
N556A-K571A		-0.224409908581464
G557A-S568A		-0.236226836157489
C544A-P550A		-0.241798897722957
C553A-G569A		-0.243821199341006
K561A-C566A		-0.247460712923403
N556A-L565A		-0.250894204166209
C564A-W570A		-0.251956958671846
P550A-S560A		-0.253330002069151
C549A-T573A		-0.270345095607284
C553A-G572A		-0.277939626562521
C553A-Q558A		-0.297417735273126
C553A-K561A		-0.318240240485532
C553A-K571A		-0.319916828070232
A547A-K561A		-0.338261640550517
S554A-L565A		-0.342324778164571
F567A-T573A		-0.420883981251318
R563A-T573A		-0.549283154546985
C553A-F567A		-0.640410918112941