[Fri Aug 26 17:45:59 2016] >Input file: TMQ9QBY2S3D.pdb >TM segments: 207-231_ 295-312_ 314-333 MAIDEN score = 14.2108 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C298 -C332 10 N297 -C332 1.21929245314847 I309 -F317 1.19094115239678 R300 -H331 1.04652755388689 N297 -H331 0.709644389778833 I296 -C332 0.690198525464368 M311 -F317 0.573277340355391 H310 -F317 0.433636115858924 N302 -K307 0.404076802957002 R306 -Y318 0.401644977194458 A221 -I227 0.385947477569643 H310 -K315 0.372431675290605 C220 -I227 0.364876036050731 M311 -A316 0.360803447536538 C298 -R328 0.326904402079288 S308 -Y318 0.319528959119356 R300 -C332 0.268074148290643 I309 -Y318 0.262761265690649 T305 -T320 0.229863177413726 N303 -R328 0.222990944313812 Y219 -K229 0.22197289334495 C298 -I327 0.205590345547366 P222 -L228 0.20481598635709 S308 -A316 0.199153219999367 R300 -N333 0.195900269697623 I309 -A316 0.190200876636363 R300 -D326 0.18797322571173 C298 -Q329 0.183031254919079 N303 -G321 0.180182321404056 N302 -S308 0.178717047932171 H218 -F225 0.170046164752336 R300 -I327 0.166355006976172 N303 -I327 0.157199847057137 N303 -D326 0.153993249491804 N303 -D322 0.148763005092371 H218 -I227 0.141352226523701 Y318 -I323 0.137286173617156 C220 -L228 0.136667533070504 T305 -I323 0.135715477997971 P301 -Q329 0.130520712957626 R300 -Q329 0.130367048524154 P301 -H331 0.122625674790187 Q295 -N333 0.121307658354523 C298 -A330 0.118039835420187 K307 -Y318 0.116418097811441 R306 -T320 0.113981633341394 A316 -G321 0.106594815359965 N302 -A330 0.106388391393949 G325 -A330 0.106327111894624 R306 -G321 0.106187289609007 N303 -Y318 0.103748631815425 T299 -R328 0.100148301280945 Q295 -C332 0.0993817235860002 A223 -L228 0.0986534486370054 T305 -D322 0.0924451630049052 H310 -T320 0.0858045311041415 S308 -T320 0.0855723189023063 P301 -D326 0.0749957614806076 I217 -I227 0.0721646653634123 G321 -I327 0.0714942108904157 N304 -Y318 0.071183037992766 F317 -D322 0.0684027941225023 I324 -Q329 0.068309852963276 I296 -A330 0.0649826997732124 T299 -A330 0.0646641152361538 H310 -G321 0.0640048394315011 H310 -Y318 0.0634544633307993 R300 -T305 0.0616498936387992 R300 -R328 0.0611963520681844 K307 -T320 0.0552678230310859 N303 -S308 0.053432493789344 F212 -I217 0.0534238747420233 H218 -K229 0.0512604170393764 K307 -F317 0.0507662134417091 N303 -T319 0.0486608246766207 N302 -G321 0.0472423353414517 T305 -Q329 0.0402241153009347 C220 -F225 0.0384178799678523 P301 -G325 0.0369760355908841 I309 -G321 0.0368482626811644 P301 -R306 0.0364421849959293 T299 -D326 0.0327909493573038 I309 -T319 0.0286721869835649 G312 -T319 0.0282812641328398 G314 -T319 0.0216685599643005 C207 -F212 0.0205494078909556 T319 -I324 0.010494123619349 N302 -R328 0.00933650791017415 T299 -N304 0.003882832705977 K307 -T319 0.000268096374931304 K307 -G321 -0.00417346968544785 I323 -R328 -0.00444749868926475 M311 -T319 -0.00584593948058476 D322 -R328 -0.00749267209451254 T320 -I327 -0.00783986243851897 Y219 -A226 -0.0132503467195386 H218 -A226 -0.014634187612133 I296 -N333 -0.015085014874284 S308 -G321 -0.0175304202024795 T299 -Q329 -0.0175359559455388 N303 -I309 -0.0194782875210207 N304 -T319 -0.0201041264085733 T305 -G325 -0.0242043067507507 P301 -I327 -0.0249561662879719 T305 -D326 -0.0270771933907943 P301 -A330 -0.0287170114402553 D322 -I327 -0.0312037124199644 Y219 -G224 -0.0331936167886875 T299 -I327 -0.0333967846737337 K315 -T320 -0.0343415041211874 A221 -K229 -0.0376937637877609 R306 -T319 -0.0404924172815344 Q295 -H331 -0.0501959987027671 T305 -R328 -0.0506881839747982 Y219 -L228 -0.0536887568718911 M311 -T320 -0.0551715240640149 T320 -G325 -0.0554885048954517 S308 -K315 -0.059558122293025 N304 -I327 -0.060292748728056 G312 -Y318 -0.0606583406404111 N304 -I309 -0.0683069780118268 N302 -H331 -0.0700577759943438 N303 -A330 -0.0709643986992543 N302 -D326 -0.0719070585383061 N297 -A330 -0.0720124646578322 P222 -I227 -0.0724272771280132 N302 -Q329 -0.0725517650909779 T299 -N333 -0.0922556451200792 R300 -G325 -0.0932921155708648 H310 -A316 -0.096328764972613 T305 -Y318 -0.0981821024104303 Y219 -F225 -0.0985184071294452 R306 -I323 -0.102516557091224 I309 -G314 -0.103179409950589 H310 -T319 -0.106607702481139 G321 -D326 -0.118021218043341 R306 -D322 -0.118264133188389 G321 -R328 -0.119557380572735 N304 -G321 -0.120475925348432 P301 -C332 -0.122195451198978 T305 -F317 -0.122860065322016 V210 -I215 -0.129341870641409 T305 -I327 -0.131545842042502 P301 -N333 -0.131704642615039 T305 -G321 -0.139777408782771 I323 -Q329 -0.141042209024795 K307 -A316 -0.141562541043689 R306 -A316 -0.147179730277286 D326 -H331 -0.149118496922656 C220 -A226 -0.150205114614937 A221 -A226 -0.16048850164431 I309 -K315 -0.162510652264796 N303 -Q329 -0.162732583747126 N297 -Q329 -0.17071413756112 I309 -T320 -0.17075073267429 S308 -T319 -0.179364699314436 R306 -I327 -0.180995879315044 M311 -Y318 -0.194970182029356 R306 -F317 -0.1989561894218 P301 -K307 -0.225737866581197 Y219 -I227 -0.233195328564394 G312 -F317 -0.24459667152546 C220 -K229 -0.246062579480939 H218 -L228 -0.257151283396839 S308 -F317 -0.265928964546611 T299 -C332 -0.269086941425723 N302 -I327 -0.276695279132473 A221 -L228 -0.287758649839352 R300 -A330 -0.288835729704314 R306 -M311 -0.311999139423012 T305 -T319 -0.32431730190328 C298 -N333 -0.327219434761518 P208 -E213 -0.349368894034178 C298 -H331 -0.389984087341855 T299 -H331 -0.425664232450843 P301 -R328 -0.475680481928494 I296 -H331 -0.512336519768204 N297 -N333 -0.849971379456752